Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: Exoribonuclease, phosphorolytic domain 2

Term: IPR015847  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene1259 SustainPine v3.0 3377
AutoFact: polyribonucleotide nucleotidyltransferase [Arabidopsis thaliana] emb|CAB43864.1| polynucleotide phosphorylase [Arabidopsis thaliana] emb|CAB43865.1| polynucleotide phosphorylase [Arabidopsis thaliana] emb|CAB87625.1| polynucleotide phosphorylase [Arabidop 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene2855 SustainPine v3.0 312
AutoFact: Polyribonucleotide phophorylase (Fragment) n=1 Tax=Spinacia oleracea RepID=Q41370_SPIOL 1.0e-31
FL-Next: tr=Polyribonucleotide nucleotidyltransferase; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Sma3: Polynucleotide phosphorylase 1.122e-08
Internal
sp_v3.0_unigene3193 SustainPine v3.0 1599
AutoFact: Exosome complex exonuclease rrp43, putative n=1 Tax=Ricinus communis RepID=B9T1F1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Exosome complex exonuclease RRP43 3.392e-09
Complete
sp_v3.0_unigene5392 SustainPine v3.0 1686
AutoFact: 3'-5'-exoribonuclease family protein [Arabidopsis thaliana] ref|NP_850537.1| 3'-5'-exoribonuclease family protein [Arabidopsis thaliana] gb|AAG40370.1|AF325018_1 AT3g07750 [Arabidopsis thaliana] dbj|BAC43581.1| putative 3' exoribonuclease [Arabidopsis tha 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr4 scaffold_6, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene7144 SustainPine v3.0 1418
AutoFact: exosome complex component RRP41 [Arabidopsis thaliana] ref|NP_001118878.1| exosome complex component RRP41 [Arabidopsis thaliana] gb|AAF04590.1|AF191741_1 exonuclease RRP41 [Arabidopsis thaliana] emb|CAB71092.1| exonuclease RRP41 [Arabidopsis thaliana] db 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene7302 SustainPine v3.0 2289
AutoFact: Exosome complex exonuclease rrp45, putative n=1 Tax=Ricinus communis RepID=B9SYQ9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Nucleolar autoantigen-like protein 5.58e-09
Complete
sp_v3.0_unigene13241 SustainPine v3.0 815
AutoFact: Exosome complex exonuclease rrp43, putative n=1 Tax=Ricinus communis RepID=B9T1F1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Exosome complex exonuclease RRP43 1.777e-09
C-terminus
sp_v3.0_unigene13580 SustainPine v3.0 602
AutoFact: Polynucleotide phosphorylase n=1 Tax=Pisum sativum RepID=O24288_PEA 0.0
FL-Next: tr=Polynucleotide phosphorylase; Pisum sativum (Garden pea). 0.0
Sma3: Polynucleotide phosphorylase 5.675e-12
Internal
sp_v3.0_unigene15106 SustainPine v3.0 606
AutoFact: polyribonucleotide nucleotidyltransferase [Arabidopsis thaliana] emb|CAB43864.1| polynucleotide phosphorylase [Arabidopsis thaliana] emb|CAB43865.1| polynucleotide phosphorylase [Arabidopsis thaliana] emb|CAB87625.1| polynucleotide phosphorylase [Arabidop 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Putative N-terminus
sp_v3.0_unigene59195 SustainPine v3.0 255
AutoFact: Polyribonucleotide nucleotidyltransferase, putative n=1 Tax=Ricinus communis RepID=B9SI65_RICCO 1.0e-17
FL-Next: tr=Polyribonucleotide nucleotidyltransferase, putative; Ricinus communis (Castor bean). 0.0
Sma3: Polynucleotide phosphorylase 2.613e-08
Internal
sp_v3.0_unigene62638 SustainPine v3.0 307
AutoFact: 3'-5'-exoribonuclease family protein [Arabidopsis thaliana] ref|NP_850537.1| 3'-5'-exoribonuclease family protein [Arabidopsis thaliana] gb|AAG40370.1|AF325018_1 AT3g07750 [Arabidopsis thaliana] dbj|BAC43581.1| putative 3' exoribonuclease [Arabidopsis tha 3.0e-23
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene64396 SustainPine v3.0 128
AutoFact: putative polyribonucleotide nucleotidyltransferase [Oryza sativa Japonica Group] 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene75805 SustainPine v3.0 354
AutoFact: Polynucleotide phosphorylase n=1 Tax=Pisum sativum RepID=O24288_PEA 4.0e-24
FL-Next: tr=Polynucleotide phosphorylase; Pisum sativum (Garden pea). 0.0
Sma3: Polynucleotide phosphorylase 1.122e-08
Internal
sp_v3.0_unigene75827 SustainPine v3.0 209
AutoFact: polyribonucleotide nucleotidyltransferase [Arabidopsis thaliana] emb|CAB43864.1| polynucleotide phosphorylase [Arabidopsis thaliana] emb|CAB43865.1| polynucleotide phosphorylase [Arabidopsis thaliana] emb|CAB87625.1| polynucleotide phosphorylase [Arabidop 1.0e-09
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene77834 SustainPine v3.0 341
AutoFact: Exosome component 4 n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8NCK3_COPC7 5.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene80317 SustainPine v3.0 205
AutoFact: polynucleotide phosphorylase [Pisum sativum] 1.0e-12
FL-Next: tr=Putative uncharacterized protein Sb02g003900; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Sma3: Putative polynucleotide phosphorylase 1.439e-08
Internal
sp_v3.0_unigene94659 SustainPine v3.0 610
AutoFact: polyribonucleotide nucleotidyltransferase [Arabidopsis thaliana] emb|CAB43864.1| polynucleotide phosphorylase [Arabidopsis thaliana] emb|CAB43865.1| polynucleotide phosphorylase [Arabidopsis thaliana] emb|CAB87625.1| polynucleotide phosphorylase [Arabidop 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Polyribonucleotide nucleotidyltransferase, putative 2.802e-08
Internal
sp_v3.0_unigene103954 SustainPine v3.0 352
AutoFact: Polynucleotide phosphorylase n=2 Tax=Arabidopsis RepID=Q9S7G6_ARATH 4.0e-31
FL-Next: tr=Polynucleotide phosphorylase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene110831 SustainPine v3.0 379
AutoFact: polyribonucleotide phophorylase [Spinacia oleracea] 1.0e-18
FL-Next: tr=Polyribonucleotide nucleotidyltransferase; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Sma3: Polynucleotide phosphorylase 1.657e-08
Putative N-terminus
sp_v3.0_unigene111128 SustainPine v3.0 182
AutoFact: putative polyribonucleotide nucleotidyltransferase [Oryza sativa Japonica Group] 1.0e-09
FL-Next: tr=Putative uncharacterized protein Sb04g026110; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain