Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Mini-chromosome maintenance, DNA-dependent ATPase

Term: IPR001208  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene1893 SustainPine v3.0 3240
AutoFact: [L] COG1241 Predicted ATPase involved in replication control, Cdc46/Mcm family 0.0
FL-Next: sp=Protein PROLIFERA; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Chromosome undetermined scaffold_267, whole genome shotgun sequence 8.644e-07
Complete
sp_v3.0_unigene4122 SustainPine v3.0 3573
AutoFact: DNA replication licensing factor MCM5 [Aspergillus niger CBS 513.88] emb|CAK44374.1| unnamed protein product [Aspergillus niger] 0.0
FL-Next: tr=Os02g0797400 protein; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Chromosome undetermined scaffold_155, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene6204 SustainPine v3.0 4065
AutoFact: DNA replication licensing factor MCM3 homolog 2 [Zea mays] sp|Q9SX04.1|MCM32_MAIZE RecName: Full=DNA replication licensing factor MCM3 homolog 2; AltName: Full=Replication origin activator 2; Short=ROA-2 gb|AAD48086.1|AF073330_1 replication origin activat 0.0
FL-Next: sp=DNA replication licensing factor MCM3 homolog 3; Zea mays (Maize). 0.0
Sma3: Minichromosome maintenance protein 3 2.202e-08
Misassembled
sp_v3.0_unigene6757 SustainPine v3.0 3008
AutoFact: putative replication licensing factor MCM4 [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Protein PROLIFERA; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Chromosome chr3 scaffold_8, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene7277 SustainPine v3.0 3199
AutoFact: [L] COG1241 Predicted ATPase involved in replication control, Cdc46/Mcm family 0.0
FL-Next: sp=DNA replication licensing factor MCM3 homolog 1; Zea mays (Maize). 0.0
Sma3: Putative uncharacterized protein 0.0
Putative Complete
sp_v3.0_unigene10650 SustainPine v3.0 733
AutoFact: Unassigned protein
FL-Next: tr=DNA replication licensing factor MCM6; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
C-terminus
sp_v3.0_unigene11225 SustainPine v3.0 849
AutoFact: putative DNA replication licensing factor [Arabidopsis thaliana] 5.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr2 scaffold_97, whole genome shotgun sequence 4.025e-09
Complete
sp_v3.0_unigene11596 SustainPine v3.0 829
AutoFact: FAD-dependent oxidoreductase-like protein [Arabidopsis thaliana] gb|AAV63877.1| hypothetical protein [Arabidopsis thaliana] gb|AEC07333.1| FAD-dependent oxidoreductase-like protein [Arabidopsis thaliana] 4.0e-30
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Putative N-terminus
sp_v3.0_unigene12103 SustainPine v3.0 2602
AutoFact: replication licensing factor MCM7 homologue [Zea mays] emb|CAC44902.1| replication licensing factor MCM7 homologue [Zea mays] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr7 scaffold_42, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene12614 SustainPine v3.0 1052
AutoFact: FAD-dependent oxidoreductase-like protein [Arabidopsis thaliana] gb|AAV63877.1| hypothetical protein [Arabidopsis thaliana] gb|AEC07333.1| FAD-dependent oxidoreductase-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Putative D-amino acid dehydrogenase 1.89e-09
C-terminus
sp_v3.0_unigene15304 SustainPine v3.0 300
AutoFact: putative DNA replication licensing factor [Arabidopsis thaliana] 4.0e-32
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal
sp_v3.0_unigene44060 SustainPine v3.0 1281
AutoFact: DNA replication licensing factor MCM5 [Aspergillus niger CBS 513.88] emb|CAK44374.1| unnamed protein product [Aspergillus niger] 0.0
FL-Next: sp=DNA replication licensing factor MCM3 homolog 1; Zea mays (Maize). 0.0
Putative C-terminus
sp_v3.0_unigene49855 SustainPine v3.0 2875
AutoFact: DNA replication licensing factor MCM3 homolog 2 [Zea mays] sp|Q9SX04.1|MCM32_MAIZE RecName: Full=DNA replication licensing factor MCM3 homolog 2; AltName: Full=Replication origin activator 2; Short=ROA-2 gb|AAD48086.1|AF073330_1 replication origin activat 0.0
FL-Next: sp=DNA replication licensing factor MCM3 homolog 3; Zea mays (Maize). 0.0
Sma3: Minichromosome maintenance protein 3 2.202e-08
Complete
sp_v3.0_unigene56724 SustainPine v3.0 436
AutoFact: RVT_2 domain containing protein 4.0e-10
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 3.623e-11
Internal
sp_v3.0_unigene61663 SustainPine v3.0 272
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Putative D-amino acid dehydrogenase 1.411e-09
Internal
sp_v3.0_unigene61982 SustainPine v3.0 305
AutoFact: RVT_2 domain containing protein 5.0e-06
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 4.828e-17
Internal
sp_v3.0_unigene62817 SustainPine v3.0 104
AutoFact: MCM domain containing protein 2.0e-08
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Sma3: Chromosome chr2 scaffold_97, whole genome shotgun sequence 2.658e-06
Internal
sp_v3.0_unigene64097 SustainPine v3.0 217
AutoFact: putative DNA replication licensing factor [Arabidopsis thaliana] 4.0e-24
FL-Next: sp=DNA replication licensing factor MCM3 homolog 3; Zea mays (Maize). 0.0
Sma3: Chromosome chr2 scaffold_97, whole genome shotgun sequence 5.954e-06
Internal
sp_v3.0_unigene65329 SustainPine v3.0 220
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Putative N-terminus
sp_v3.0_unigene65388 SustainPine v3.0 255
AutoFact: Unassigned protein 2.0e-33
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Transposon protein, putative, unclassified 2.126e-07
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain