Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Regulator of chromosome condensation, RCC1

Term: IPR000408  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene13256 SustainPine v3.0 502
• AutoFact: AMP dependent CoA ligase, putative n=1 Tax=Ricinus communis RepID=B9T306_RICCO 2.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 4-coumarate-coa ligase 1.753e-08
Internal
sp_v3.0_unigene13604 SustainPine v3.0 850
• AutoFact: Serine/threonine-protein kinase Nek8, putative n=1 Tax=Ricinus communis RepID=B9SE02_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene14246 SustainPine v3.0 1129
• AutoFact: Ran GTPase binding protein, putative n=1 Tax=Ricinus communis RepID=B9S5S9_RICCO 1.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene14256 SustainPine v3.0 933
• AutoFact: polygalacturonase [Arabidopsis thaliana] gb|AEE30389.1| polygalacturonase [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Polygalacturonase 0.0
C-terminus
sp_v3.0_unigene14331 SustainPine v3.0 497
• AutoFact: Unassigned protein
• FL-Next: tr=Uncharacterized protein; Brachypodium distachyon (Purple false brome) (Trachynia distachya). 0.0
• Sma3: Ran GTPase binding protein, putative 4.535e-07
Internal
sp_v3.0_unigene14392 SustainPine v3.0 1234
• AutoFact: Histone-lysine N-methyltransferase SUVR3 n=2 Tax=Andropogoneae RepID=B6TYP5_MAIZE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone-lysine N-methyltransferase SUVR3 3.506e-09
Complete
sp_v3.0_unigene14440 SustainPine v3.0 1152
• AutoFact: Os03g0758000 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q9AUV7_ORYSJ 2.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WRKY transcription factor, putative 3.366e-13
C-terminus
sp_v3.0_unigene14586 SustainPine v3.0 328
• AutoFact: Ran GTPase binding protein, putative n=3 Tax=rosids RepID=B9SM24_RICCO 7.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene14669 SustainPine v3.0 299
• AutoFact: acetyl CoA carboxylase [Glycine max] 1.0e-37
• FL-Next: sp=Acetyl-CoA carboxylase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Acetyl-CoA carboxylase 2.84e-20
Internal
sp_v3.0_unigene14679 SustainPine v3.0 638
• AutoFact: ARO1-like protein 2 n=1 Tax=Medicago truncatula RepID=B7FF18_MEDTR 0.0
• FL-Next: tr=ARO1-like protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
• Sma3: ARO1-like protein 1 3.471e-17
N-terminus
sp_v3.0_unigene14778 SustainPine v3.0 822
• AutoFact: Os01g0689900 protein n=3 Tax=Oryza sativa Japonica Group RepID=Q5N7Q8_ORYSJ 0.0
• FL-Next: tr=Uncharacterized protein; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
• Sma3: Wall-associated kinase, putative 2.254e-21
Putative C-terminus
sp_v3.0_unigene14817 SustainPine v3.0 534
• AutoFact: Zinc finger protein, putative [Solanum demissum] 7.0e-11
• FL-Next: tr=Uncharacterized protein; Brachypodium distachyon (Purple false brome) (Trachynia distachya). 0.0
• Sma3: Ran GTPase binding protein, putative 8.268e-20
N-terminus
sp_v3.0_unigene14918 SustainPine v3.0 1959
• AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9T7M5_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WD-repeat protein, putative 2.708e-14
Putative Complete
sp_v3.0_unigene15138 SustainPine v3.0 4085
• AutoFact: DNA damage-binding protein 1 n=5 Tax=core eudicotyledons RepID=DDB1_SOLCE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr10 scaffold_43, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene15307 SustainPine v3.0 887
• AutoFact: Catalytic, putative n=1 Tax=Ricinus communis RepID=B9SHS6_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Hsr203J 3.384e-13
C-terminus
sp_v3.0_unigene15432 SustainPine v3.0 1756
• AutoFact: Copine, putative n=1 Tax=Ricinus communis RepID=B9RAR5_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Copine, putative 1.213e-20
Complete
sp_v3.0_unigene15586 SustainPine v3.0 1317
• AutoFact: Laccase n=1 Tax=Pinus taeda RepID=Q9AUH9_PINTA 0.0
• FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
• Sma3: Laccase, putative 0.0
N-terminus
sp_v3.0_unigene15589 SustainPine v3.0 1022
• AutoFact: putative receptor-like protein kinase [Arabidopsis thaliana] sp|O04086.1|Y1105_ARATH RecName: Full=Probable receptor-like protein kinase At1g11050; Flags: Precursor gb|AAB65477.1| Ser/Thr protein kinase isolog; 46094-44217 [Arabidopsis thaliana] gb|AEE286 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP binding protein, putative 3.036e-13
Complete
sp_v3.0_unigene15595 SustainPine v3.0 530
• AutoFact: Ran GTPase binding protein, putative n=3 Tax=rosids RepID=B9SM24_RICCO 0.0
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Sma3: Ran GTPase binding protein, putative 1.908e-22
Putative N-terminus
sp_v3.0_unigene15714 SustainPine v3.0 1485
• AutoFact: serine/threonine protein kinase isolog [Arabidopsis thaliana] gb|AAO30076.1| serine/threonine protein kinase isolog [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr10 scaffold_81, whole genome shotgun sequence 3.661e-11
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain