Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Regulator of chromosome condensation, RCC1

Term: IPR000408  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene165899 SustainPine v3.0 467
• AutoFact: putative LRR receptor-like serine/threonine-protein kinase [Arabidopsis thaliana] sp|C0LGG7.2|Y1534_ARATH RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At1g53420; Flags: Precursor gb|AEE32938.1| putative LRR receptor-like serine 5.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr19 scaffold_4, whole genome shotgun sequence 1.96e-13
Putative N-terminus
sp_v3.0_unigene166106 SustainPine v3.0 449
• AutoFact: ARO1-like protein (Fragment) n=1 Tax=Pinus taeda RepID=B7FF15_PINTA 1.0e-24
• FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
• Sma3: ARO1-like protein 2 5.925e-14
C-terminus
sp_v3.0_unigene166184 SustainPine v3.0 193
• AutoFact: 4-coumarate:CoA ligase n=2 Tax=Populus trichocarpa RepID=B2Z6P2_POPTR 9.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acyl:coa ligase 5.336e-35
Internal
sp_v3.0_unigene166315 SustainPine v3.0 302
• AutoFact: ARO1-like protein (Fragment) n=1 Tax=Pinus taeda RepID=B7FF15_PINTA 9.94922e-44
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
• Sma3: ARO1-like protein 1 7.274e-17
Internal
sp_v3.0_unigene166413 SustainPine v3.0 169
• AutoFact: Alpha-expansin 1 n=1 Tax=Coffea arabica RepID=D3J164_COFAR 3.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Expansin 0.0
Putative C-terminus
sp_v3.0_unigene166490 SustainPine v3.0 362
• AutoFact: Putative alpha-expansin (Fragment) n=1 Tax=Eucalyptus globulus RepID=Q4F8J9_EUCGL 6.02558e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Expansin 0.0
C-terminus
sp_v3.0_unigene166685 SustainPine v3.0 255
• AutoFact: Methionine-R-sulfoxide reductase SelR, putative n=1 Tax=Neosartorya fischeri NRRL 181 RepID=A1DMI4_NEOFI 7.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Methionine sulfoxide reductase type 1.691e-10
Internal
sp_v3.0_unigene166905 SustainPine v3.0 307
• AutoFact: DUF822 domain containing protein 3.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: BRASSINAZOLE-RESISTANT 1 protein, putative 1.166e-12
N-terminus
sp_v3.0_unigene167061 SustainPine v3.0 382
• AutoFact: AP2/ERF domain-containing transcription factor n=1 Tax=Populus trichocarpa RepID=A9PLA4_POPTR 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 2.389e-36
N-terminus
sp_v3.0_unigene167343 SustainPine v3.0 243
• AutoFact: Putative expansin n=1 Tax=Gerbera hybrid cultivar RepID=B6CJW6_GERHY 1.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Expansin 0.0
C-terminus
sp_v3.0_unigene167360 SustainPine v3.0 102
• AutoFact: TPA_inf: WRKY transcription factor 29 [Oryza sativa (japonica cultivar-group)] gb|EAZ02533.1| hypothetical protein OsI_24642 [Oryza sativa Indica Group] 5.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WRKY transcription factor, putative 8.272e-08
Internal
sp_v3.0_unigene167717 SustainPine v3.0 97
• AutoFact: methyltransferase-like protein 1 [Arabidopsis thaliana] sp|Q94AI4.1|METL1_ARATH RecName: Full=Methyltransferase-like protein 1; AltName: Full=Protein EMBRYO DEFECTIVE 1691 gb|AAK76690.1| unknown protein [Arabidopsis thaliana] gb|AAN41392.1| unknown protei 1.0e-05
• FL-Next: sp=Methyltransferase-like protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene182889 SustainPine v3.0 806
• AutoFact: Beta-carotene hydroxylase n=1 Tax=Carica papaya RepID=F1JTK4_CARPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta-carotene hydroxylase 0.0
C-terminus
sp_v3.0_unigene183088 SustainPine v3.0 825
• AutoFact: Laccase n=1 Tax=Pinus taeda RepID=Q9AUI0_PINTA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Laccase 0.0
Internal
sp_v3.0_unigene183309 SustainPine v3.0 395
• AutoFact: Laccase n=2 Tax=Pinus taeda RepID=Q9AUI3_PINTA 2.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome undetermined scaffold_92, whole genome shotgun sequence 4.398e-10
N-terminus
sp_v3.0_unigene183327 SustainPine v3.0 686
• AutoFact: Similar to peptide transporter [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr18 scaffold_122, whole genome shotgun sequence 5.884e-29
C-terminus
sp_v3.0_unigene183571 SustainPine v3.0 404
• AutoFact: U-box domain-containing protein 13 [Arabidopsis thaliana] sp|Q9SNC6.1|PUB13_ARATH RecName: Full=U-box domain-containing protein 13; AltName: Full=Plant U-box protein 13 emb|CAB62321.1| arm repeat containing protein homolog [Arabidopsis thaliana] gb|AAK687 2.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene183974 SustainPine v3.0 333
• AutoFact: Similar to peptide transporter [Arabidopsis thaliana] 3.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr18 scaffold_122, whole genome shotgun sequence 8.927e-27
Internal
sp_v3.0_unigene184300 SustainPine v3.0 534
• AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 0.0
• FL-Next: tr=Expansin; Pinus taeda (Loblolly pine). 0.0
• Sma3: Expansin 0.0
N-terminus
sp_v3.0_unigene184472 SustainPine v3.0 341
• AutoFact: DNA repair protein xp-E, putative n=1 Tax=Ricinus communis RepID=B9SKT9_RICCO 5.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain