Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Regulator of chromosome condensation, RCC1

Term: IPR000408  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene162162 SustainPine v3.0 404
AutoFact: mate efflux domain-containing protein [Arabidopsis thaliana] dbj|BAB10542.1| unnamed protein product [Arabidopsis thaliana] gb|AAK76728.1| unknown protein [Arabidopsis thaliana] gb|AAL85047.1| unknown protein [Arabidopsis thaliana] gb|AED96215.1| mate eff 4.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: TRANSPARENT TESTA 12 protein, putative 3.311e-34
Putative C-terminus
sp_v3.0_unigene162535 SustainPine v3.0 372
AutoFact: laccase [Pinus taeda] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Laccase, putative 0.0
Internal
sp_v3.0_unigene162992 SustainPine v3.0 396
AutoFact: peptide methionine sulfoxide reductase msrB [Neurospora crassa OR74A] gb|EAA28294.1| peptide methionine sulfoxide reductase msrB [Neurospora crassa OR74A] 6.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Methionine sulfoxide reductase type 2.77e-14
C-terminus
sp_v3.0_unigene163019 SustainPine v3.0 252
AutoFact: Arm domain containing protein 1.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene163080 SustainPine v3.0 360
AutoFact: Copine (Calcium-dependent phospholipid-binding protein) family protein [Arabidopsis thaliana] gb|AEE34698.1| Copine (Calcium-dependent phospholipid-binding protein) family protein [Arabidopsis thaliana] 1.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Copine, putative 6.434e-17
Internal
sp_v3.0_unigene163163 SustainPine v3.0 285
AutoFact: DUF659 domain containing protein 5.0e-28
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene163656 SustainPine v3.0 334
AutoFact: Probable fatty acyl-CoA reductase 4 n=3 Tax=Arabidopsis RepID=FACR4_ARATH 3.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Male sterility protein, putative 2.029e-15
Internal
sp_v3.0_unigene164125 SustainPine v3.0 374
AutoFact: DUF659 domain containing protein 9.0e-28
FL-Next: tr=Putative uncharacterized protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Sma3: HAT family dimerisation domain containing protein 2.101e-09
Internal
sp_v3.0_unigene164189 SustainPine v3.0 385
AutoFact: Exostosin domain containing protein 6.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Exostosin-like 1.38e-13
Internal
sp_v3.0_unigene164291 SustainPine v3.0 320
AutoFact: Cell cycle regulatory protein, putative n=1 Tax=Ricinus communis RepID=B9SEZ8_RICCO 3.0e-08
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Cell cycle regulatory protein, putative 4.386e-06
Internal
sp_v3.0_unigene164757 SustainPine v3.0 195
AutoFact: exostosin-like protein [Arabidopsis thaliana] gb|AAF03467.1|AC009327_6 hypothetical protein [Arabidopsis thaliana] gb|AAP21279.1| At3g03650 [Arabidopsis thaliana] dbj|BAF00242.1| hypothetical protein [Arabidopsis thaliana] gb|AEE73967.1| exostosin-like pr 3.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Secondary cell wall-related glycosyltransferase family 47 1.896e-07
Internal
sp_v3.0_unigene164787 SustainPine v3.0 362
AutoFact: ubiquitin-protein ligase RNF115/126 [Arabidopsis thaliana] ref|NP_973651.1| ubiquitin-protein ligase RNF115/126 [Arabidopsis thaliana] ref|NP_973652.1| ubiquitin-protein ligase RNF115/126 [Arabidopsis thaliana] gb|AAB86443.1| expressed protein [Arabidopsi 7.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RHC1A 1.545e-16
Internal
sp_v3.0_unigene164943 SustainPine v3.0 368
AutoFact: Laccase n=3 Tax=Pinus RepID=F4MKL7_PINPS 1.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Laccase 5.18e-40
Internal
sp_v3.0_unigene164964 SustainPine v3.0 321
AutoFact: mate efflux domain-containing protein [Arabidopsis thaliana] dbj|BAB10542.1| unnamed protein product [Arabidopsis thaliana] gb|AAK76728.1| unknown protein [Arabidopsis thaliana] gb|AAL85047.1| unknown protein [Arabidopsis thaliana] gb|AED96215.1| mate eff 7.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: TRANSPARENT TESTA 12 protein, putative 6.136e-10
Internal
sp_v3.0_unigene165094 SustainPine v3.0 186
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene165125 SustainPine v3.0 233
AutoFact: [DZ] COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing proteins 4.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene165371 SustainPine v3.0 388
AutoFact: PREDICTED: similar to 40S ribosomal protein S14 isoform 2 n=1 Tax=Ciona intestinalis RepID=UPI00006A3A93 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S14 2.53e-24
Putative N-terminus
sp_v3.0_unigene165453 SustainPine v3.0 324
AutoFact: DNA damage-binding protein 1 n=5 Tax=core eudicotyledons RepID=DDB1_SOLCE 7.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene165729 SustainPine v3.0 420
AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=1 Tax=Oryza sativa Japonica Group RepID=Q2QP36_ORYSJ 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 4.107e-36
Internal
sp_v3.0_unigene165849 SustainPine v3.0 375
AutoFact: 40S ribosomal protein S11 n=6 Tax=Basidiomycota RepID=E3JWG6_PUCGT 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S14 2.53e-24
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain