Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Regulator of chromosome condensation, RCC1

Term: IPR000408  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene158464 SustainPine v3.0 409
• AutoFact: WD repeat domain phosphoinositide-interacting protein 3 [Dictyostelium discoideum AX4] gb|EAL66150.1| WD repeat domain phosphoinositide-interacting protein 3 [Dictyostelium discoideum AX4] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WD-repeat domain phosphoinositide-interacting protein 3 7.997e-09
Internal
sp_v3.0_unigene159082 SustainPine v3.0 314
• AutoFact: pfam07002, Copine, Copine 2.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Copine, putative 6.874e-21
Internal
sp_v3.0_unigene159281 SustainPine v3.0 514
• AutoFact: 4-coumarate--CoA ligase-like 5 n=3 Tax=Arabidopsis RepID=4CLL5_ARATH 1.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acyl:coa ligase 6.257e-14
Putative N-terminus
sp_v3.0_unigene159493 SustainPine v3.0 233
• AutoFact: disease resistance N like protein [Arabidopsis thaliana] emb|CAB78479.1| disease resistance N like protein [Arabidopsis thaliana] 3.0e-09
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Putative N-terminus
sp_v3.0_unigene159593 SustainPine v3.0 390
• AutoFact: Cell wall protein Exp4 n=1 Tax=Mirabilis jalapa RepID=Q84L38_MIRJA 2.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Expansin 0.0
Putative N-terminus
sp_v3.0_unigene159732 SustainPine v3.0 224
• AutoFact: DUF659 domain containing protein 8.0e-29
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene160162 SustainPine v3.0 410
• AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] dbj|BAB11582.1| unnamed protein product [Arabidopsis thaliana] gb|AED96466.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 4.2039e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WD-repeat protein, putative 3.451e-14
Internal
sp_v3.0_unigene160171 SustainPine v3.0 330
• AutoFact: putative threonyl-tRNA synthetase, putative / threonine--tRNA ligase [Arabidopsis thaliana] gb|AEC05873.1| putative threonyl-tRNA synthetase, putative / threonine--tRNA ligase [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene160214 SustainPine v3.0 372
• AutoFact: Unassigned protein
• FL-Next: tr=Putative ZR1 protein; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Ran GTPase binding protein, putative 1.771e-19
Putative N-terminus
sp_v3.0_unigene160289 SustainPine v3.0 424
• AutoFact: Acetyl CoA carboxylase n=12 Tax=Papilionoideae RepID=Q42793_SOYBN 0.0
• FL-Next: sp=Acetyl-CoA carboxylase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Acetyl-CoA carboxylase 5.246e-18
Internal
sp_v3.0_unigene160630 SustainPine v3.0 371
• AutoFact: Laccase n=2 Tax=Pinus taeda RepID=Q9AUI3_PINTA 0.0
• FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
• Sma3: Laccase 1.54143e-44
C-terminus
sp_v3.0_unigene160876 SustainPine v3.0 266
• AutoFact: lethal (1) G0255, isoform B [Drosophila melanogaster] gb|AAN09177.1| lethal (1) G0255, isoform B [Drosophila melanogaster] gb|ACU51768.1| LP02262p [Drosophila melanogaster] 4.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene161165 SustainPine v3.0 211
• AutoFact: RNA helicase, putative n=2 Tax=Perkinsus marinus ATCC 50983 RepID=C5LBR0_9ALVE 4.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 4.821e-08
Internal
sp_v3.0_unigene161212 SustainPine v3.0 395
• AutoFact: mate efflux domain-containing protein [Arabidopsis thaliana] dbj|BAB10542.1| unnamed protein product [Arabidopsis thaliana] gb|AAK76728.1| unknown protein [Arabidopsis thaliana] gb|AAL85047.1| unknown protein [Arabidopsis thaliana] gb|AED96215.1| mate eff 3.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: TRANSPARENT TESTA 12 protein, putative 2.319e-30
Internal
sp_v3.0_unigene161370 SustainPine v3.0 208
• AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 1.0e-26
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Internal
sp_v3.0_unigene161497 SustainPine v3.0 247
• AutoFact: Gag-protease-integrase-RT-RNaseH polyprotein n=1 Tax=Glycine max RepID=B5U9F7_SOYBN 2.0e-35
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Transposon protein, putative, unclassified 7.069e-08
Internal
sp_v3.0_unigene161653 SustainPine v3.0 367
• AutoFact: AMP dependent CoA ligase, putative n=1 Tax=Ricinus communis RepID=B9SCH9_RICCO 6.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acyl:coa ligase 2.204e-08
Internal
sp_v3.0_unigene161816 SustainPine v3.0 269
• AutoFact: alpha-expansin 2 [Populus tremula x Populus tremuloides] 2.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Expansin 0.0
C-terminus
sp_v3.0_unigene161895 SustainPine v3.0 361
• AutoFact: DUF659 domain containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene162114 SustainPine v3.0 338
• AutoFact: Ser/Thr protein kinase isolog [Arabidopsis thaliana] 3.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr10 scaffold_81, whole genome shotgun sequence 3.0e-15
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain