Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Regulator of chromosome condensation, RCC1

Term: IPR000408  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene153473 SustainPine v3.0 382
AutoFact: chloroplast methionine sulfoxide reductase B2 precursor [Nicotiana tabacum] 5.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Methionine sulfoxide reductase type 1.584e-21
Putative Complete
sp_v3.0_unigene153681 SustainPine v3.0 397
AutoFact: 40S ribosomal protein S14 [Coprinopsis cinerea okayama7#130] gb|EAU86619.1| 40S ribosomal protein S14 [Coprinopsis cinerea okayama7#130] 7.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S14 3.92e-24
N-terminus
sp_v3.0_unigene153910 SustainPine v3.0 413
AutoFact: methionine sulfoxide reductase [Plantago major] 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Methionine sulfoxide reductase type 4.6e-14
Complete
sp_v3.0_unigene153981 SustainPine v3.0 437
AutoFact: Methionine-R-sulfoxide reductase SelR, putative n=1 Tax=Aspergillus flavus NRRL3357 RepID=B8N2G6_ASPFN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Methionine sulfoxide reductase type 9.995e-18
Putative Complete
sp_v3.0_unigene154151 SustainPine v3.0 259
AutoFact: similar to Human XE169 protein [Arabidopsis thaliana] 1.0e-13
FL-Next: sp=Probable lysine-specific demethylase JMJ14; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Jumonji domain protein 6.128e-08
Internal
sp_v3.0_unigene154254 SustainPine v3.0 281
AutoFact: DEAD/DEAH box helicase domain protein n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FH88_FLAJ1 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dead box ATP-dependent RNA helicase, putative 6.818e-11
Internal
sp_v3.0_unigene154650 SustainPine v3.0 267
AutoFact: 40S ribosomal protein S14 n=1 Tax=Chlorella variabilis RepID=E1ZI50_9CHLO 2.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S14 2.83e-24
Putative C-terminus
sp_v3.0_unigene155197 SustainPine v3.0 553
AutoFact: Peroxisomal biogenesis factor 7 n=3 Tax=Danio rerio RepID=A8KBW8_DANRE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Peroxisomal targeting signal 2 receptor 2.543e-13
Internal
sp_v3.0_unigene155568 SustainPine v3.0 400
AutoFact: RecName: Full=40S ribosomal protein S14 emb|CAA50506.1| 40S ribosomal protein S14 [Podocoryna carnea] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S14 4.06e-24
N-terminus
sp_v3.0_unigene155666 SustainPine v3.0 353
AutoFact: Peroxisomal targeting signal 2 receptor n=2 Tax=Dictyostelium RepID=PEX7_DICDI 3.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Peroxisomal targeting signal type 2 receptor 4.479e-13
Internal
sp_v3.0_unigene155969 SustainPine v3.0 340
AutoFact: [DZ] COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing proteins 5.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene156309 SustainPine v3.0 495
AutoFact: Fumarate hydratase (Fumarate hydratase Class II) n=5 Tax=Pseudomonas RepID=F2KE95_PSEBN 1.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fumarate hydratase 7.233e-08
Putative N-terminus
sp_v3.0_unigene156571 SustainPine v3.0 345
AutoFact: Laccase n=2 Tax=Pinus taeda RepID=Q9AUI3_PINTA 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Laccase, putative 0.0
Internal
sp_v3.0_unigene156776 SustainPine v3.0 533
AutoFact: RecName: Full=40S ribosomal protein S14 emb|CAA50506.1| 40S ribosomal protein S14 [Podocoryna carnea] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S14 2.937e-24
N-terminus
sp_v3.0_unigene157438 SustainPine v3.0 397
AutoFact: peptide methionine sulfoxide reductase msrB [Coprinopsis cinerea okayama7#130] gb|EAU90603.1| peptide methionine sulfoxide reductase msrB [Coprinopsis cinerea okayama7#130] 1.99993e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Methionine sulfoxide reductase type 3.928e-10
N-terminus
sp_v3.0_unigene157663 SustainPine v3.0 359
AutoFact: Gag-protease-integrase-RT-RNaseH polyprotein n=1 Tax=Glycine max RepID=B5U9F7_SOYBN 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.433e-30
Internal
sp_v3.0_unigene157780 SustainPine v3.0 325
AutoFact: Peptide methionine sulfoxide reductase msrB n=1 Tax=Pichia angusta DL-1 RepID=E7R6J9_PICAD 2.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Methionine sulfoxide reductase type 6.962e-18
C-terminus
sp_v3.0_unigene157975 SustainPine v3.0 556
AutoFact: DNA damage-binding protein 1a n=5 Tax=Brassicaceae RepID=DDB1A_ARATH 0.0
FL-Next: sp=DNA damage-binding protein 1a; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene158186 SustainPine v3.0 550
AutoFact: RNA helicase [Oryza sativa Japonica Group] 7.00005e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dead box ATP-dependent RNA helicase, putative 4.213e-14
C-terminus
sp_v3.0_unigene158461 SustainPine v3.0 292
AutoFact: polygalacturonase PG1-like [Oryza sativa Japonica Group] dbj|BAD68939.1| polygalacturonase PG1-like [Oryza sativa Japonica Group] 7.0e-35
FL-Next: sp=Polygalacturonase; Juniperus ashei (Ozark white cedar). 0.0
Sma3: Polygalacturonase 8.815e-16
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain