Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Regulator of chromosome condensation, RCC1

Term: IPR000408  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene148212 SustainPine v3.0 366
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Tetratricopeptide-like helical 7.437e-12
Internal
sp_v3.0_unigene148348 SustainPine v3.0 269
• AutoFact: Ran GTPase binding protein, putative n=1 Tax=Ricinus communis RepID=B9T5E9_RICCO 9.0e-31
• FL-Next: tr=Ran GTPase binding protein, putative; Ricinus communis (Castor bean). 0.0
• Sma3: Ran GTPase binding protein, putative 3.68e-22
Internal
sp_v3.0_unigene148536 SustainPine v3.0 327
• AutoFact: pentatricopeptide, putative [Oryza sativa Japonica Group] gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group] 3.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 8.601e-14
Internal
sp_v3.0_unigene148835 SustainPine v3.0 290
• AutoFact: RecName: Full=Protein spotted leaf 11; AltName: Full=Cell death-related protein SPL11 sp|Q0IMG9.2|SL11_ORYSJ RecName: Full=E3 ubiquitin-protein ligase SPL11; AltName: Full=Cell death-related protein SPL11; AltName: Full=Protein spotted leaf 11 gb|AAT94160 8.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Spotted leaf protein, putative 3.795e-08
Internal
sp_v3.0_unigene148918 SustainPine v3.0 364
• AutoFact: Laccase n=1 Tax=Pinus taeda RepID=Q9AUH9_PINTA 6.0e-36
• FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
• Sma3: Laccase 0.0
C-terminus
sp_v3.0_unigene148922 SustainPine v3.0 273
• AutoFact: Copine family protein n=2 Tax=Zea mays RepID=B6TK33_MAIZE 1.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Copine, putative 8.743e-21
Internal
sp_v3.0_unigene149131 SustainPine v3.0 245
• AutoFact: zinc finger protein [Arabidopsis thaliana] 8.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ran GTPase binding protein, putative 2.006e-22
Putative C-terminus
sp_v3.0_unigene149169 SustainPine v3.0 164
• AutoFact: Glycoside hydrolase, family 28 n=1 Tax=Medicago truncatula RepID=Q2HVV9_MEDTR 2.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Polygalacturonase 2.2e-29
Internal
sp_v3.0_unigene149349 SustainPine v3.0 208
• AutoFact: Acyl:coa ligase n=1 Tax=Populus trichocarpa RepID=B9GQ39_POPTR 5.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acyl:coa ligase 9.205e-08
Internal
sp_v3.0_unigene149759 SustainPine v3.0 397
• AutoFact: [RTKL] COG0515 Serine/threonine protein kinase 1.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative Receptor-like serine/threonine kinase(RFK1) 1.772e-12
Internal
sp_v3.0_unigene149770 SustainPine v3.0 416
• AutoFact: Laccase n=1 Tax=Pinus taeda RepID=Q9AUH9_PINTA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Laccase, putative 0.0
Internal
sp_v3.0_unigene149800 SustainPine v3.0 362
• AutoFact: RNA helicase, DRH1 [Arabidopsis thaliana] 2.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 14 4.022e-08
Putative C-terminus
sp_v3.0_unigene150089 SustainPine v3.0 154
• AutoFact: putative transcription regulatory protein [Oryza sativa Japonica Group] gb|ABB47976.2| transcriptional regulator, putative, expressed [Oryza sativa Japonica Group] 4.0e-12
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Sma3: Transcriptional regulator, putative, expressed 7.403e-15
Internal
sp_v3.0_unigene150306 SustainPine v3.0 445
• AutoFact: 40S ribosomal protein S14 n=6 Tax=Viridiplantae RepID=RS14_CHLRE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S14 2.83e-24
Putative C-terminus
sp_v3.0_unigene150621 SustainPine v3.0 294
• AutoFact: RCC1 domain containing protein 6.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene150867 SustainPine v3.0 323
• AutoFact: Very similar to receptor-like serine/threonine kinase [Arabidopsis thaliana] 8.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative Receptor-like serine/threonine kinase(RFK1) 1.327e-12
Internal
sp_v3.0_unigene151917 SustainPine v3.0 485
• AutoFact: DEAD/DEAH box RNA helicase, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0MT79_PHYIT 2.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 5.252e-14
C-terminus
sp_v3.0_unigene152514 SustainPine v3.0 377
• AutoFact: Acetyl-CoA carboxylase n=1 Tax=Dictyostelium purpureum RepID=F1A0W2_DICPU 2.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acetyl-CoA carboxylase 5.397e-22
Putative N-terminus
sp_v3.0_unigene152906 SustainPine v3.0 413
• AutoFact: Putative DEAD/DEAH box helicase n=1 Tax=Trichinella spiralis RepID=E5SYL4_TRISP 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 21 1.116e-07
C-terminus
sp_v3.0_unigene153361 SustainPine v3.0 392
• AutoFact: DUF659 domain containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: HAT dimerisation domain-containing protein-like 3.556e-07
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain