Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Regulator of chromosome condensation, RCC1

Term: IPR000408  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene140947 SustainPine v3.0 1370
• AutoFact: Expansin n=2 Tax=Sapindaceae RepID=A4GWU5_LITCN 3.00018e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Expansin 0.0
Putative Complete
sp_v3.0_unigene141335 SustainPine v3.0 288
• AutoFact: DUF659 domain containing protein 6.0e-31
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene141682 SustainPine v3.0 671
• AutoFact: shaggy-related protein kinase 1 [Physcomitrella patens] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glycogen synthase kinase-3 beta, putative 5.001e-20
Putative C-terminus
sp_v3.0_unigene141952 SustainPine v3.0 507
• AutoFact: Laccase n=2 Tax=Pinus taeda RepID=Q9AUI3_PINTA 0.0
• FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
• Sma3: Laccase 9.80909e-45
Putative C-terminus
sp_v3.0_unigene142216 SustainPine v3.0 436
• AutoFact: Dehydration-responsive element binding protein 3 n=1 Tax=Glycine max RepID=Q2VEU3_SOYBN 3.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RAP2-like protein 2.713e-27
N-terminus
sp_v3.0_unigene142365 SustainPine v3.0 469
• AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Expansin 0.0
C-terminus
sp_v3.0_unigene142533 SustainPine v3.0 325
• AutoFact: RecName: Full=Probable protein phosphatase 2C 43; Short=OsPP2C43 emb|CAD41383.2| OSJNBa0088A01.23 [Oryza sativa Japonica Group] gb|EAY95304.1| hypothetical protein OsI_17129 [Oryza sativa Indica Group] gb|EAZ31769.1| hypothetical protein OsJ_15921 [Oryza 2.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein phosphatase 2c, putative 1.787e-14
C-terminus
sp_v3.0_unigene142830 SustainPine v3.0 294
• AutoFact: 40S ribosomal protein S14 [Oryza sativa Indica Group] 2.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S14 3.92e-24
Putative N-terminus
sp_v3.0_unigene143106 SustainPine v3.0 406
• AutoFact: Acyl:coa ligase n=1 Tax=Populus trichocarpa RepID=B9GMK1_POPTR 3.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AMP dependent CoA ligase, putative 3.657e-32
Internal
sp_v3.0_unigene143392 SustainPine v3.0 349
• AutoFact: Expansin 2 n=1 Tax=Zinnia violacea RepID=Q9LLB2_ZINEL 1.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Expansin 0.0
C-terminus
sp_v3.0_unigene143661 SustainPine v3.0 330
• AutoFact: RING-finger protein n=1 Tax=Capsicum annuum RepID=Q08ET6_CAPAN 5.99994e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Copine, putative 8.841e-21
Internal
sp_v3.0_unigene143832 SustainPine v3.0 945
• AutoFact: Acyl:coa ligase n=1 Tax=Populus trichocarpa RepID=B9GQ39_POPTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acyl:coa ligase 4.243e-38
C-terminus
sp_v3.0_unigene143893 SustainPine v3.0 760
• AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 0.0
• FL-Next: tr=Expansin; Pinus taeda (Loblolly pine). 0.0
• Sma3: Expansin 0.0
C-terminus
sp_v3.0_unigene144203 SustainPine v3.0 518
• AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 0.0
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 3.284e-31
Internal
sp_v3.0_unigene144499 SustainPine v3.0 970
• AutoFact: Pre-mRNA-processing factor 19 [Arabidopsis thaliana] sp|Q94BR4.1|PR19A_ARATH RecName: Full=Pre-mRNA-processing factor 19 homolog 1; AltName: Full=MOS4-associated complex protein 3A; Short=MAC protein 3A; AltName: Full=Plant U-box protein 59; AltName: Full 3.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: GAST1 protein, putative 1.287e-07
N-terminus
sp_v3.0_unigene144599 SustainPine v3.0 534
• AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 0.0
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 0.0
Internal
sp_v3.0_unigene144868 SustainPine v3.0 560
• AutoFact: coatomer subunit epsilon-1 [Arabidopsis thaliana] sp|Q9SA78.1|COPE1_ARATH RecName: Full=Coatomer subunit epsilon-1; AltName: Full=Epsilon-coat protein 1; Short=Epsilon-COP 1 gb|AAD25750.1|AC007060_8 Strong similarity to F19I3.7 gi|3033380 putative coatome 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Epsilon1-COP 1.351e-08
Putative N-terminus
sp_v3.0_unigene145284 SustainPine v3.0 1207
• AutoFact: flocculin [Trichomonas vaginalis G3] gb|EAX95321.1| flocculin, putative [Trichomonas vaginalis G3] 4.0e-13
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Extensin 3.042e-30
C-terminus
sp_v3.0_unigene147892 SustainPine v3.0 282
• AutoFact: Zinc finger protein, putative [Solanum demissum] 5.0e-06
• FL-Next: sp=4-hydroxyphenylpyruvate dioxygenase; Physcomitrella patens subsp. patens (Moss). 0.0
• Sma3: Ran GTPase binding protein, putative 6.513e-14
Internal
sp_v3.0_unigene148177 SustainPine v3.0 472
• AutoFact: polygalacturonase precursor [Glycine max] 3.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Polygalacturonase 8.13e-11
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain