Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Regulator of chromosome condensation, RCC1

Term: IPR000408  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene134191 SustainPine v3.0 216
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 1.042e-09
Internal
sp_v3.0_unigene134240 SustainPine v3.0 233
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene134467 SustainPine v3.0 434
AutoFact: Unassigned protein
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
N-terminus
sp_v3.0_unigene134691 SustainPine v3.0 216
AutoFact: Expansin-5 (Fragment) n=1 Tax=Petunia hybrid cultivar RepID=F5ATG8_9SOLA 9.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Expansin 0.0
C-terminus
sp_v3.0_unigene135193 SustainPine v3.0 238
AutoFact: fumarase [Solanum tuberosum] 9.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene135515 SustainPine v3.0 435
AutoFact: ethylene-responsive transcription factor ERF017 [Arabidopsis thaliana] sp|Q84QC2.1|ERF17_ARATH RecName: Full=Ethylene-responsive transcription factor ERF017 gb|AAP06820.1| putative AP2 domain transcription factor [Arabidopsis thaliana] gb|AEE29818.1| ethy 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RAP2-like protein 1.341e-27
N-terminus
sp_v3.0_unigene135681 SustainPine v3.0 433
AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SAJ6_RICCO 2.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dead box ATP-dependent RNA helicase, putative 1.633e-09
Putative C-terminus
sp_v3.0_unigene135733 SustainPine v3.0 346
AutoFact: Cu-oxidase_2 domain containing protein 1.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Laccase, putative 0.0
Internal
sp_v3.0_unigene135801 SustainPine v3.0 335
AutoFact: protein kinase-like protein [Arabidopsis thaliana] 5.0e-27
FL-Next: tr=Uncharacterized protein; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
Sma3: Kinase, putative 1.258e-23
Internal
sp_v3.0_unigene135924 SustainPine v3.0 196
AutoFact: BES1/BZR1-like protein (Fragment) n=1 Tax=Solanum nigrum RepID=F4YBE3_SOLNI 6.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Brassinazole-resistant 1 protein 5.965e-09
Internal
sp_v3.0_unigene136298 SustainPine v3.0 249
AutoFact: putative threonyl-tRNA synthetase, putative / threonine--tRNA ligase [Arabidopsis thaliana] gb|AEC05873.1| putative threonyl-tRNA synthetase, putative / threonine--tRNA ligase [Arabidopsis thaliana] 6.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene137353 SustainPine v3.0 237
AutoFact: mate efflux-like protein [Arabidopsis thaliana] gb|AAM98128.1| unknown protein [Arabidopsis thaliana] gb|AAP31960.1| At1g15170 [Arabidopsis thaliana] gb|AEE29277.1| mate efflux-like protein [Arabidopsis thaliana] 9.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: TRANSPARENT TESTA 12 protein, putative 2.765e-31
Internal
sp_v3.0_unigene137752 SustainPine v3.0 406
AutoFact: Carbohydrate oxidase n=1 Tax=Helianthus annuus RepID=Q8SA59_HELAN 1.0e-26
FL-Next: sp=Reticuline oxidase; Papaver somniferum (Opium poppy). 0.0
Sma3: Reticuline oxidase, putative 2.8026e-45
Internal
sp_v3.0_unigene140227 SustainPine v3.0 420
AutoFact: Alpha-expansin (Fragment) n=4 Tax=Pseudotsuga RepID=C6F6F4_PSEMZ 1.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Expansin 0.0
Putative C-terminus
sp_v3.0_unigene140323 SustainPine v3.0 381
AutoFact: UV-damaged DNA binding factor - like protein [Arabidopsis thaliana] 1.0e-14
FL-Next: sp=DNA damage-binding protein 1a; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene140452 SustainPine v3.0 734
AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Expansin 0.0
C-terminus
sp_v3.0_unigene140506 SustainPine v3.0 854
AutoFact: DUF1777 multi-domain protein 3.0e-09
FL-Next: sp=Serine/arginine-rich splicing factor RSZ23; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Splicing factor, arginine/serine-rich 7 5.103e-15
C-terminus
sp_v3.0_unigene140686 SustainPine v3.0 586
AutoFact: [I] COG0657 Esterase/lipase 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative PrMC3 7.161e-31
Internal
sp_v3.0_unigene140735 SustainPine v3.0 843
AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Expansin 0.0
C-terminus
sp_v3.0_unigene140758 SustainPine v3.0 547
AutoFact: [I] COG0657 Esterase/lipase 6.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative PrMC3 1.073e-33
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain