Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Regulator of chromosome condensation, RCC1

Term: IPR000408  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene131095 SustainPine v3.0 419
• AutoFact: Laccase n=1 Tax=Pinus taeda RepID=Q9AUH9_PINTA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Laccase 7.00649e-45
C-terminus
sp_v3.0_unigene131156 SustainPine v3.0 226
• AutoFact: Beta-carotene hydroxylase n=3 Tax=Arabidopsis RepID=Q9SZZ8_ARATH 5.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta-carotene hydroxylase 0.0
Putative C-terminus
sp_v3.0_unigene131180 SustainPine v3.0 347
• AutoFact: Polygalacturonase 5 n=1 Tax=Solanum lycopersicum RepID=O22313_SOLLC 6.0e-23
• FL-Next: sp=Polygalacturonase; Juniperus ashei (Ozark white cedar). 0.0
• Sma3: Putative polygalacturonase 3.599e-11
Internal
sp_v3.0_unigene131196 SustainPine v3.0 324
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: TRANSPARENT TESTA 12 protein, putative 5.67e-20
C-terminus
sp_v3.0_unigene131207 SustainPine v3.0 223
• AutoFact: zinc finger protein [Arabidopsis thaliana] 3.0e-05
• FL-Next: tr=Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Ran GTPase binding protein, putative 6.016e-10
C-terminus
sp_v3.0_unigene131358 SustainPine v3.0 402
• AutoFact: 40S ribosomal protein S14 [Oryza sativa Indica Group] 2.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S14 4.355e-24
Putative N-terminus
sp_v3.0_unigene131397 SustainPine v3.0 562
• AutoFact: Polygalacturonase (Fragment) n=2 Tax=Musa acuminata RepID=A9UFC8_MUSAC 2.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene131556 SustainPine v3.0 377
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Tetratricopeptide-like helical 1.322e-14
Internal
sp_v3.0_unigene131677 SustainPine v3.0 372
• AutoFact: Pentatricopeptide repeat protein 79 (Fragment) n=2 Tax=Funariaceae RepID=F5CAE5_FUNHY 6.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 3.251e-08
Internal
sp_v3.0_unigene131725 SustainPine v3.0 380
• AutoFact: Coatomer epsilon subunit, putative n=1 Tax=Ricinus communis RepID=B9SV80_RICCO 4.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Epsilon1-COP 8.439e-09
N-terminus
sp_v3.0_unigene131974 SustainPine v3.0 377
• AutoFact: Ran GTPase binding protein, putative n=1 Tax=Ricinus communis RepID=B9SJF7_RICCO 5.00264e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ran GTPase binding protein, putative 6.388e-19
Putative C-terminus
sp_v3.0_unigene132001 SustainPine v3.0 631
• AutoFact: DUF659 domain containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: HAT dimerisation domain-containing protein-like 3.938e-07
Putative Complete
sp_v3.0_unigene132593 SustainPine v3.0 372
• AutoFact: cysteine-rich receptor-like protein kinase 40 [Arabidopsis thaliana] gb|AEE82399.1| cysteine-rich receptor-like protein kinase 40 [Arabidopsis thaliana] 4.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP binding protein, putative 1.81e-12
Internal
sp_v3.0_unigene132689 SustainPine v3.0 491
• AutoFact: putative acetyl-CoA carboxylase [Oryza sativa Japonica Group] 0.0
• FL-Next: sp=Acetyl-CoA carboxylase 1; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Acetyl-CoA carboxylase 4.648e-18
Internal
sp_v3.0_unigene132745 SustainPine v3.0 400
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide, putative, expressed 8.153e-08
Internal
sp_v3.0_unigene132877 SustainPine v3.0 451
• AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 14 dbj|BAD68264.1| putative p68 RNA helicase [Oryza sativa Japonica Group] gb|EEE53957.1| hypothetical protein OsJ_00557 [Oryza sativa Japonica Group] gb|ACS44654.1| ATP-dependent RNA helicase DB10 [Oryza 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 3.057e-10
Internal
sp_v3.0_unigene133210 SustainPine v3.0 450
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g18750, chloroplastic; Flags: Precursor emb|CAB37460.1| putative protein [Arabidopsis thaliana] emb|CAB 1.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 1.939e-21
Internal
sp_v3.0_unigene133335 SustainPine v3.0 406
• AutoFact: DUF659 domain containing protein 5.0e-27
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene133599 SustainPine v3.0 284
• AutoFact: cytoplasmic ribosomal protein S14 [Brassica napus] 1.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S14 3.92e-24
N-terminus
sp_v3.0_unigene133631 SustainPine v3.0 215
• AutoFact: DUF659 domain containing protein 1.0e-28
• FL-Next: tr=Putative uncharacterized protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain