Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Regulator of chromosome condensation, RCC1

Term: IPR000408  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene104560 SustainPine v3.0 376
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene104618 SustainPine v3.0 422
AutoFact: RecName: Full=Protein spotted leaf 11; AltName: Full=Cell death-related protein SPL11 sp|Q0IMG9.2|SL11_ORYSJ RecName: Full=E3 ubiquitin-protein ligase SPL11; AltName: Full=Cell death-related protein SPL11; AltName: Full=Protein spotted leaf 11 gb|AAT94160 5.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: E3 ubiquitin ligase PUB14, putative 1.297e-11
Internal
sp_v3.0_unigene104626 SustainPine v3.0 418
AutoFact: Polygalacturonase, putative n=1 Tax=Ricinus communis RepID=B9RZX1_RICCO 8.0e-25
FL-Next: tr=Allergen Cry j 2; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
Putative N-terminus
sp_v3.0_unigene104696 SustainPine v3.0 581
AutoFact: putative pattern formation protein EMB30 [Arabidopsis thaliana] 0.0
FL-Next: sp=Pattern formation protein EMB30; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Pattern formation protein, putative 8.714e-12
Internal
sp_v3.0_unigene104699 SustainPine v3.0 888
AutoFact: protein kinase domain-containing protein [Arabidopsis thaliana] gb|AAM61567.1| putative receptor ser thr protein kinase [Arabidopsis thaliana] gb|AEE74708.1| protein kinase domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP binding protein, putative 1.233e-14
N-terminus
sp_v3.0_unigene104990 SustainPine v3.0 360
AutoFact: CCR4-Not complex component, Not1 family protein [Oryza sativa Japonica Group] 5.0e-22
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Internal
sp_v3.0_unigene105301 SustainPine v3.0 290
AutoFact: Polygalacturonase n=1 Tax=Citrus sinensis RepID=A2IB56_CITSI 5.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene105306 SustainPine v3.0 527
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide, putative, expressed 3.742e-10
Putative C-terminus
sp_v3.0_unigene105435 SustainPine v3.0 568
AutoFact: Gag/pol polyprotein n=3 Tax=Pisum sativum RepID=Q6WAY3_PEA 0.0
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 4.708e-19
Putative Complete
sp_v3.0_unigene105836 SustainPine v3.0 452
AutoFact: RCC1 domain containing protein 2.0e-08
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus
sp_v3.0_unigene105984 SustainPine v3.0 371
AutoFact: Gag-protease-integrase-RT-RNaseH polyprotein n=1 Tax=Glycine max RepID=B5U9F7_SOYBN 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Transposon protein, putative, unclassified 2.05e-07
Internal
sp_v3.0_unigene106026 SustainPine v3.0 405
AutoFact: putative transcription regulatory protein [Oryza sativa Japonica Group] gb|ABB47976.2| transcriptional regulator, putative, expressed [Oryza sativa Japonica Group] 2.0e-29
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Sma3: Transcriptional regulator, putative, expressed 1.446e-14
Internal
sp_v3.0_unigene106646 SustainPine v3.0 492
AutoFact: putative fatty acyl-CoA reductase 4 [Arabidopsis thaliana] dbj|BAE99400.1| acyl CoA reductase - protein [Arabidopsis thaliana] gb|ACF22894.1| At3g44540 [Arabidopsis thaliana] gb|AEE77913.1| putative fatty acyl-CoA reductase 4 [Arabidopsis thaliana] 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Male sterility protein, putative 1.992e-15
Internal
sp_v3.0_unigene106675 SustainPine v3.0 223
AutoFact: transcriptional activator DEMETER [Arabidopsis thaliana] sp|Q8LK56.2|DME_ARATH RecName: Full=Transcriptional activator DEMETER; AltName: Full=DNA glycosylase-related protein DME gb|ABC61677.1| DNA glycosylase DEMETER [Arabidopsis thaliana] gb|AED90761.1| 2.0e-20
FL-Next: Isoform 1 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME 0.0
Sma3: Repressor of silencing 1 9.835e-09
Internal
sp_v3.0_unigene106699 SustainPine v3.0 214
AutoFact: DNA-binding protein WRKY2-like n=2 Tax=Oryza sativa RepID=Q9FE35_ORYSJ 8.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: WRKY transcription factor, putative 7.97e-07
Putative C-terminus
sp_v3.0_unigene106968 SustainPine v3.0 641
AutoFact: Ubiquitin-protein ligase, putative n=1 Tax=Ricinus communis RepID=B9RMH5_RICCO 2.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Spotted leaf protein 11 4.648e-07
Putative N-terminus
sp_v3.0_unigene107019 SustainPine v3.0 354
AutoFact: [DZ] COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing proteins 0.0001
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ran GTPase binding protein, putative 8.166e-19
Internal
sp_v3.0_unigene107232 SustainPine v3.0 212
AutoFact: wall-associated receptor kinase-like 14 [Arabidopsis thaliana] ref|NP_850041.1| wall-associated receptor kinase-like 14 [Arabidopsis thaliana] sp|Q8RY67.2|WAKLO_ARATH RecName: Full=Wall-associated receptor kinase-like 14; Flags: Precursor gb|AAC23760.2| p 7.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative wall-associated kinase 4 3.095e-13
Internal
sp_v3.0_unigene107817 SustainPine v3.0 165
AutoFact: receptor-like kinase SYMRK [Lotus japonicus] 2.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Kinase, putative 4.428e-13
Internal
sp_v3.0_unigene107819 SustainPine v3.0 326
AutoFact: SEC7-like guanine nucleotide exchange protein [Arabidopsis thaliana] gb|AAF76474.1|AC020622_8 Contains similarity to a guanine nucleotide exchange factor from Homo sapiens gb|AF111162 and contains a Sec7 PF|01369 domain [Arabidopsis thaliana] gb|AEE27360. 3.0e-35
FL-Next: sp=Pattern formation protein EMB30; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative guanine nucleotide-exchange protein GEP2 3.549e-12
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain