Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Regulator of chromosome condensation, RCC1

Term: IPR000408  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene102700 SustainPine v3.0 390
AutoFact: Pre-mRNA-processing-splicing factor [Arabidopsis thaliana] gb|AAD55467.1|AC009322_7 Putative splicing factor Prp8 [Arabidopsis thaliana] gb|AEE36353.1| Pre-mRNA-processing-splicing factor [Arabidopsis thaliana] 0.0
FL-Next: tr=Os06g0167000 protein; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene102713 SustainPine v3.0 535
AutoFact: SET domain-containing protein [Arabidopsis thaliana] gb|AAY25446.1| At1g01920 [Arabidopsis thaliana] gb|AEE27354.1| SET domain-containing protein [Arabidopsis thaliana] 6.0e-40
FL-Next: sp=Aldolases N-methyltransferase, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative N-terminus
sp_v3.0_unigene102879 SustainPine v3.0 665
AutoFact: uncharacterized protein [Arabidopsis thaliana] emb|CAB87674.1| putative protein [Arabidopsis thaliana] gb|AAL24182.1| AT5g12010/F14F18_180 [Arabidopsis thaliana] gb|AAN73294.1| At5g12010/F14F18_180 [Arabidopsis thaliana] gb|AED91750.1| uncharacterized pro 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene103081 SustainPine v3.0 684
AutoFact: laccase [Pinus taeda] 0.0
FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
Sma3: Laccase, putative 0.0
Internal
sp_v3.0_unigene103111 SustainPine v3.0 513
AutoFact: Transcriptional activator DEMETER n=2 Tax=Arabidopsis thaliana RepID=DME_ARATH 3.0e-27
FL-Next: Isoform 1 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME 0.0
Sma3: Repressor of silencing 1 1.103e-08
Internal
sp_v3.0_unigene103185 SustainPine v3.0 479
AutoFact: Proline-rich receptor-like protein kinase PERK10 n=1 Tax=Arabidopsis thaliana RepID=PEK10_ARATH 1.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Somatic embryogenesis receptor kinase, putative 7.305e-10
Internal
sp_v3.0_unigene103216 SustainPine v3.0 543
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RB88_RICCO 1.00053e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Leucine-rich repeat receptor-like protein kinase 2.647e-17
Internal
sp_v3.0_unigene103259 SustainPine v3.0 694
AutoFact: elongator protein 2 [Arabidopsis thaliana] gb|AEE32440.1| elongator protein 2 [Arabidopsis thaliana] 5.0e-23
FL-Next: sp=Elongator complex protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene103336 SustainPine v3.0 577
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 2.389e-12
Internal
sp_v3.0_unigene103573 SustainPine v3.0 749
AutoFact: HhH-GPD domain containing protein 6.0e-16
FL-Next: sp=Protein ROS1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA glycosylase 2.265e-10
Internal
sp_v3.0_unigene103682 SustainPine v3.0 542
AutoFact: [DZ] COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing proteins 1.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: E3 ubiquitin-protein ligase 2.613e-11
Internal
sp_v3.0_unigene103950 SustainPine v3.0 401
AutoFact: DUF659 domain containing protein 9.99967e-42
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene103990 SustainPine v3.0 318
AutoFact: Ran GTPase binding protein, putative n=1 Tax=Ricinus communis RepID=B9SJF7_RICCO 4.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ran GTPase binding protein, putative 5.233e-19
Internal
sp_v3.0_unigene104146 SustainPine v3.0 733
AutoFact: mate efflux domain-containing protein [Arabidopsis thaliana] dbj|BAB10542.1| unnamed protein product [Arabidopsis thaliana] gb|AAK76728.1| unknown protein [Arabidopsis thaliana] gb|AAL85047.1| unknown protein [Arabidopsis thaliana] gb|AED96215.1| mate eff 6.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: TRANSPARENT TESTA 12 protein, putative 2.297e-34
N-terminus
sp_v3.0_unigene104275 SustainPine v3.0 690
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600 gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana] gb|AEC06244.1| pentatricopeptide repe 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 9.481e-11
Internal
sp_v3.0_unigene104291 SustainPine v3.0 506
AutoFact: JmjC domain containing protein 7.0e-36
FL-Next: sp=Probable lysine-specific demethylase ELF6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Jumonji domain protein 4.055e-23
Internal
sp_v3.0_unigene104307 SustainPine v3.0 580
AutoFact: proteasome assembly chaperone 2 [Arabidopsis thaliana] dbj|BAB01690.1| unnamed protein product [Arabidopsis thaliana] gb|ABD59042.1| At3g18940 [Arabidopsis thaliana] gb|AEE76171.1| proteasome assembly chaperone 2 [Arabidopsis thaliana] 3.99931e-42
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
N-terminus
sp_v3.0_unigene104323 SustainPine v3.0 398
AutoFact: Polygalacturonase n=1 Tax=Citrus sinensis RepID=A2IB56_CITSI 1.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Polygalacturonase 2.935e-24
Internal
sp_v3.0_unigene104325 SustainPine v3.0 349
AutoFact: ARO1-like protein 1 n=1 Tax=Vitis vinifera RepID=A5AQH2_VITVI 9.0e-29
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Sma3: ARO1-like protein 1 2.075e-17
Internal
sp_v3.0_unigene104550 SustainPine v3.0 740
AutoFact: jumonji/Zn finger-class transcription factor ELF6 [Arabidopsis thaliana] gb|AAT77780.1| early flowering 6 [Arabidopsis thaliana] gb|AED90717.1| jumonji/Zn finger-class transcription factor ELF6 [Arabidopsis thaliana] 0.0
FL-Next: sp=Probable lysine-specific demethylase ELF6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: JmjC domain containing protein, expressed 1.317e-07
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain