Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: Regulator of chromosome condensation, RCC1

Term: IPR000408  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene68167 SustainPine v3.0 316
• AutoFact: AMP dependent CoA ligase, putative n=1 Tax=Ricinus communis RepID=B9T306_RICCO 4.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene68867 SustainPine v3.0 204
• AutoFact: Unassigned protein
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal
sp_v3.0_unigene69009 SustainPine v3.0 329
• AutoFact: uncharacterized protein [Arabidopsis thaliana] gb|AAF02145.1|AC009853_5 unknown protein [Arabidopsis thaliana] gb|AAK76612.1| unknown protein [Arabidopsis thaliana] gb|AAM44916.1| unknown protein [Arabidopsis thaliana] gb|AEE74531.1| uncharacterized prote 6.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene69206 SustainPine v3.0 187
• AutoFact: F-box/kelch-repeat protein [Arabidopsis thaliana] sp|Q9FII1.1|FK118_ARATH RecName: Full=F-box/kelch-repeat protein At5g42360 gb|AAK56271.1|AF367282_1 AT5g42360/MDH9_5 [Arabidopsis thaliana] dbj|BAB10477.1| unnamed protein product [Arabidopsis thaliana] gb 9.0e-13
• FL-Next: sp=F-box/kelch-repeat protein At5g42360; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene70308 SustainPine v3.0 370
• AutoFact: Arm domain containing protein 4.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene70517 SustainPine v3.0 209
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 1.153e-07
Internal
sp_v3.0_unigene70556 SustainPine v3.0 378
• AutoFact: protein kinase [Oryza sativa] 6.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr12 scaffold_18, whole genome shotgun sequence 1.703e-12
Internal
sp_v3.0_unigene70849 SustainPine v3.0 343
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9ZVF4.1|PP140_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g01510, mitochondrial; Flags: Precursor gb|AAC67327.1| hypothetical protein [Arabidopsis thaliana] gb|A 1.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 4.721e-11
Internal
sp_v3.0_unigene71034 SustainPine v3.0 154
• AutoFact: polygalacturonase [Cucumis sativus] 4.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pollen allergen 4.604e-09
Internal
sp_v3.0_unigene71042 SustainPine v3.0 382
• AutoFact: elongator protein 2 [Arabidopsis thaliana] gb|AEE32440.1| elongator protein 2 [Arabidopsis thaliana] 1.0e-13
• FL-Next: sp=Elongator complex protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene71557 SustainPine v3.0 271
• AutoFact: protein UV-B resistance 8 [Arabidopsis thaliana] dbj|BAB11034.1| UVB-resistance protein UVR8 [Arabidopsis thaliana] gb|AAM78089.1| AT5g63860/MGI19_6 [Arabidopsis thaliana] gb|AAN18169.1| At5g63860/MGI19_6 [Arabidopsis thaliana] gb|AED97805.1| protein UV-B 2.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene71710 SustainPine v3.0 424
• AutoFact: Laccase n=2 Tax=Pinus taeda RepID=Q9AUI3_PINTA 1.00053e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Laccase 0.0
C-terminus
sp_v3.0_unigene72246 SustainPine v3.0 200
• AutoFact: pullulanase-like protein (starch debranching enzyme) [Arabidopsis thaliana] 1.0e-17
• FL-Next: sp=Pullulanase 1, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Pullulanase-type starch debranching enzyme 2.502e-08
Internal
sp_v3.0_unigene72419 SustainPine v3.0 201
• AutoFact: Ureidoglycine aminohydrolase n=5 Tax=Brassicaceae RepID=Q8GXV5_ARATH 6.0e-13
• FL-Next: tr=Uncharacterized protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Putative C-terminus
sp_v3.0_unigene72477 SustainPine v3.0 271
• AutoFact: Polygalacturonase n=1 Tax=Citrus sinensis RepID=A2IB56_CITSI 2.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative allergen Cup a 2 variant 2 5.361e-06
Internal
sp_v3.0_unigene72608 SustainPine v3.0 326
• AutoFact: Alpha-expansin 15, putative n=1 Tax=Ricinus communis RepID=B9RLX1_RICCO 4.0e-24
• FL-Next: tr=Expansin; Pinus taeda (Loblolly pine). 0.0
• Sma3: Expansin 0.0
C-terminus
sp_v3.0_unigene72901 SustainPine v3.0 256
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide, putative 4.744e-06
Internal
sp_v3.0_unigene72908 SustainPine v3.0 239
• AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 1.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Expansin 0.0
N-terminus
sp_v3.0_unigene72956 SustainPine v3.0 275
• AutoFact: Laccase n=3 Tax=Pinus RepID=F4MKL7_PINPS 8.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Laccase, putative 5.992e-39
Internal
sp_v3.0_unigene73287 SustainPine v3.0 288
• AutoFact: [DZ] COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing proteins 1.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain