Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: Regulator of chromosome condensation, RCC1

Term: IPR000408  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene65388 SustainPine v3.0 255
• AutoFact: Unassigned protein 2.0e-33
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Transposon protein, putative, unclassified 2.126e-07
Internal
sp_v3.0_unigene65525 SustainPine v3.0 368
• AutoFact: Expansin 2 n=1 Tax=Cunninghamia lanceolata RepID=A1Z1N8_CUNLA 4.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Expansin 0.0
C-terminus
sp_v3.0_unigene65678 SustainPine v3.0 423
• AutoFact: Expansin-A2 n=3 Tax=Arabidopsis RepID=EXPA2_ARATH 7.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Expansin 0.0
C-terminus
sp_v3.0_unigene65980 SustainPine v3.0 374
• AutoFact: Transcriptional factor TINY, putative n=1 Tax=Ricinus communis RepID=B9RQZ6_RICCO 7.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RAP2-like protein 4.449e-28
N-terminus
sp_v3.0_unigene66038 SustainPine v3.0 407
• AutoFact: pfam00847, AP2, AP2 domain 3.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 0.0
N-terminus
sp_v3.0_unigene66066 SustainPine v3.0 396
• AutoFact: P72 DEAD box protein [Pisum sativum] 6.0e-06
• FL-Next: Isoform 3 of DEAD-box ATP-dependent RNA helicase 14 OS=Oryza sativa subsp. japonica GN=Os01g0172200 0.0
Internal
sp_v3.0_unigene66117 SustainPine v3.0 394
• AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 2.94273e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Expansin 0.0
N-terminus
sp_v3.0_unigene66219 SustainPine v3.0 498
• AutoFact: alanine aminotransferase [Deschampsia antarctica] 9.99967e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alanine aminotransferase 8.415e-20
C-terminus
sp_v3.0_unigene66537 SustainPine v3.0 372
• AutoFact: [RTKL] COG0515 Serine/threonine protein kinase 2.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative Receptor-like serine/threonine kinase(RFK1) 1.299e-12
C-terminus
sp_v3.0_unigene66565 SustainPine v3.0 337
• AutoFact: pfam00847, AP2, AP2 domain 1.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RAP2-like protein 6.303e-22
N-terminus
sp_v3.0_unigene66746 SustainPine v3.0 223
• AutoFact: Putative gag-pol polyprotein n=1 Tax=Citrus sinensis RepID=Q18L98_CITSI 4.0e-14
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 4.038e-10
Internal
sp_v3.0_unigene66844 SustainPine v3.0 355
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600 gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana] gb|AEC06244.1| pentatricopeptide repe 2.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Tetratricopeptide-like helical 2.228e-09
Internal
sp_v3.0_unigene66994 SustainPine v3.0 389
• AutoFact: Laccase n=2 Tax=Pinus taeda RepID=Q9AUI3_PINTA 9.99995e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Laccase, putative 0.0
C-terminus
sp_v3.0_unigene67009 SustainPine v3.0 203
• AutoFact: [DZ] COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing proteins 2.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Williams-Beuren syndrome chromosome region 16 protein, putative 6.335e-06
Internal
sp_v3.0_unigene67164 SustainPine v3.0 381
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Tetratricopeptide-like helical 2.691e-09
Internal
sp_v3.0_unigene67302 SustainPine v3.0 190
• AutoFact: DNA glycosylase n=2 Tax=Populus trichocarpa RepID=B9HW11_POPTR 5.0e-21
• FL-Next: Isoform 2 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME 0.0
• Sma3: Repressor of silencing 1 1.725e-08
Internal
sp_v3.0_unigene67884 SustainPine v3.0 302
• AutoFact: ccr4-not transcription complex [Aedes aegypti] gb|EAT40985.1| ccr4-not transcription complex [Aedes aegypti] 4.0e-15
• FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Putative N-terminus
sp_v3.0_unigene68044 SustainPine v3.0 231
• AutoFact: Alpha-expansin 1 n=1 Tax=Coffea arabica RepID=D3J164_COFAR 3.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Expansin 0.0
C-terminus
sp_v3.0_unigene68061 SustainPine v3.0 265
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein phosphatase 2C 1.253e-07
Internal
sp_v3.0_unigene68090 SustainPine v3.0 219
• AutoFact: SET domain-containing protein [Arabidopsis thaliana] gb|AAY25446.1| At1g01920 [Arabidopsis thaliana] gb|AEE27354.1| SET domain-containing protein [Arabidopsis thaliana] 7.0e-18
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain