Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Regulator of chromosome condensation, RCC1

Term: IPR000408  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene62543 SustainPine v3.0 255
AutoFact: [DZ] COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing proteins 3.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene62754 SustainPine v3.0 237
AutoFact: elongator protein 2 [Arabidopsis thaliana] gb|AEE32440.1| elongator protein 2 [Arabidopsis thaliana] 1.0e-15
FL-Next: sp=Elongator complex protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene62832 SustainPine v3.0 183
AutoFact: DUF659 domain containing protein 8.0e-25
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene62846 SustainPine v3.0 167
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 2.353e-07
Internal
sp_v3.0_unigene62863 SustainPine v3.0 201
AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 6.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Expansin 0.0
Internal
sp_v3.0_unigene63077 SustainPine v3.0 237
AutoFact: DUF659 domain containing protein 3.0e-34
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene63264 SustainPine v3.0 285
AutoFact: HECT domain and RCC1-like domain-containing protein 2 n=2 Tax=Zea mays RepID=B6T6V0_MAIZE 2.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene63658 SustainPine v3.0 218
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9STS9.1|PP268_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein At3g47840 emb|CAB41867.1| putative protein [Arabidopsis thaliana] gb|AEE78339.1| pentatricopeptid 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene63842 SustainPine v3.0 166
AutoFact: U-box domain-containing protein 14 [Arabidopsis thaliana] sp|Q8VZ40.1|PUB14_ARATH RecName: Full=U-box domain-containing protein 14; AltName: Full=E3 ubiquitin-protein ligase PUB14; AltName: Full=Plant U-box protein 14; AltName: Full=Prototypical U-box dom 2.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene63860 SustainPine v3.0 284
AutoFact: S-receptor kinase, putative n=1 Tax=Ricinus communis RepID=B9RJ59_RICCO 7.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr12 scaffold_18, whole genome shotgun sequence 1.16e-14
Internal
sp_v3.0_unigene64069 SustainPine v3.0 205
AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 5.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Expansin 0.0
Internal
sp_v3.0_unigene64107 SustainPine v3.0 209
AutoFact: Os02g0494700 protein n=2 Tax=Oryza sativa RepID=Q0E138_ORYSJ 5.0e-21
FL-Next: sp=Transcriptional activator DEMETER; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Repressor of silencing 1 2.159e-08
Internal
sp_v3.0_unigene64121 SustainPine v3.0 234
AutoFact: Serine/threonine-protein kinase PBS1, putative n=1 Tax=Ricinus communis RepID=B9RNY7_RICCO 6.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr19 scaffold_4, whole genome shotgun sequence 7.071e-13
Internal
sp_v3.0_unigene64141 SustainPine v3.0 215
AutoFact: Ccr4-not transcription complex, putative n=1 Tax=Ricinus communis RepID=B9RD55_RICCO 4.0e-12
FL-Next: tr=Ccr4-not transcription complex, putative; Ricinus communis (Castor bean). 0.0
Sma3: Transcriptional regulator, putative, expressed 7.973e-15
Internal
sp_v3.0_unigene64278 SustainPine v3.0 181
AutoFact: Protein phosphatase 2c, putative n=1 Tax=Ricinus communis RepID=B9SXJ0_RICCO 4.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein phosphatase 2c, putative 2.19e-15
N-terminus
sp_v3.0_unigene64661 SustainPine v3.0 168
AutoFact: Ccr4-not transcription complex, putative n=1 Tax=Ricinus communis RepID=B9RD55_RICCO 4.0e-16
FL-Next: tr=Ccr4-not transcription complex, putative; Ricinus communis (Castor bean). 0.0
Sma3: Transcriptional regulator, putative, expressed 1.126e-14
Internal
sp_v3.0_unigene64684 SustainPine v3.0 153
AutoFact: Alpha-expansin n=1 Tax=Gossypium hirsutum RepID=Q8LKJ8_GOSHI 1.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Expansin 0.0
Putative C-terminus
sp_v3.0_unigene64922 SustainPine v3.0 279
AutoFact: Tetratricopeptide-like helical n=1 Tax=Medicago truncatula RepID=Q2HUK9_MEDTR 3.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Tetratricopeptide-like helical 1.595e-09
Internal
sp_v3.0_unigene65051 SustainPine v3.0 202
AutoFact: PREDICTED: CCR4-NOT transcription complex subunit 1 [Equus caballus] 2.0e-10
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene65149 SustainPine v3.0 190
AutoFact: Putative polyprotein n=2 Tax=Oryza sativa Japonica Group RepID=Q851Y3_ORYSJ 9.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 7.825e-11
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain