Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Regulator of chromosome condensation, RCC1

Term: IPR000408  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene58655 SustainPine v3.0 357
• AutoFact: ATP-dependent RNA helicase [Arabidopsis thaliana] 3.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 13 2.532e-08
Internal
sp_v3.0_unigene58749 SustainPine v3.0 359
• AutoFact: DEAD-box ATP-dependent RNA helicase 24 [Arabidopsis thaliana] sp|O22907.2|RH24_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 24 gb|AAL15330.1| At2g47330/T8I13.17 [Arabidopsis thaliana] gb|AAB63833.2| putative ATP-dependent RNA helicase [Arabidop 3.00004e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 4.017e-10
Internal
sp_v3.0_unigene59243 SustainPine v3.0 183
• AutoFact: Glucosyltransferase n=1 Tax=Dianthus caryophyllus RepID=A7M6I1_DIACA 2.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: UDP-glucose:glucosyltransferase 1.97e-17
Internal
sp_v3.0_unigene59329 SustainPine v3.0 291
• AutoFact: transcription factor jumonji and C5HC2 type zinc finger domain-containing protein [Arabidopsis thaliana] gb|AAC12829.1| unknown protein [Arabidopsis thaliana] gb|AEC09034.1| transcription factor jumonji and C5HC2 type zinc finger domain-containing protein 3.0e-28
• FL-Next: Isoform 2 of Probable lysine-specific demethylase JMJ14 OS=Arabidopsis thaliana GN=JMJ14 0.0
• Sma3: Jumonji domain protein 3.466e-24
Internal
sp_v3.0_unigene59367 SustainPine v3.0 293
• AutoFact: rve domain containing protein 8.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Transposon protein, putative, unclassified 1.359e-08
Internal
sp_v3.0_unigene59688 SustainPine v3.0 214
• AutoFact: pentatricopeptide (PPR) repeat-containing protein 2.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Tetratricopeptide-like helical 5.242e-15
Internal
sp_v3.0_unigene59932 SustainPine v3.0 391
• AutoFact: pfam00665, rve, Integrase core domain 1.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 0.0
Internal
sp_v3.0_unigene59937 SustainPine v3.0 360
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750 gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana] emb|CAB77760.1| hypothetical protein 7.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 1.033e-10
Internal
sp_v3.0_unigene60920 SustainPine v3.0 245
• AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 6.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Expansin 0.0
Internal
sp_v3.0_unigene60980 SustainPine v3.0 122
• AutoFact: protein phosphatase 2C (PP2C) [Fagus sylvatica] 9.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein phosphatase 2C 4.503e-08
Internal
sp_v3.0_unigene61554 SustainPine v3.0 234
• AutoFact: Glyco_hydro_28 domain containing protein 5.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Polygalacturonase 1.67e-12
Internal
sp_v3.0_unigene61770 SustainPine v3.0 228
• AutoFact: Spotted leaf protein, putative n=1 Tax=Ricinus communis RepID=B9T786_RICCO 1.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene61898 SustainPine v3.0 162
• AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9RWT5_RICCO 3.0e-16
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase 13; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 13 9.017e-09
Internal
sp_v3.0_unigene61940 SustainPine v3.0 272
• AutoFact: DUF659 domain containing protein 6.0e-30
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene61941 SustainPine v3.0 362
• AutoFact: mate efflux-like protein [Arabidopsis thaliana] gb|AAM98128.1| unknown protein [Arabidopsis thaliana] gb|AAP31960.1| At1g15170 [Arabidopsis thaliana] gb|AEE29277.1| mate efflux-like protein [Arabidopsis thaliana] 1.0e-27
• FL-Next: tr=Uncharacterized protein; Lotus japonicus (Lotus corniculatus var. japonicus). 0.0
• Sma3: TRANSPARENT TESTA 12 protein, putative 5.805e-27
Complete
sp_v3.0_unigene61945 SustainPine v3.0 297
• AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 0.0
• FL-Next: tr=Expansin; Pinus taeda (Loblolly pine). 0.0
• Sma3: Expansin 0.0
Internal
sp_v3.0_unigene61976 SustainPine v3.0 291
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene61982 SustainPine v3.0 305
• AutoFact: RVT_2 domain containing protein 5.0e-06
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 4.828e-17
Internal
sp_v3.0_unigene61996 SustainPine v3.0 223
• AutoFact: Glycoside hydrolase, family 28 [Medicago truncatula] 2.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Polygalacturonase 9.59e-37
Internal
sp_v3.0_unigene62191 SustainPine v3.0 317
• AutoFact: pentatricopeptide, putative [Oryza sativa Japonica Group] gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group] 1.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 1.06e-11
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain