Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Regulator of chromosome condensation, RCC1

Term: IPR000408  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene53704 SustainPine v3.0 345
• AutoFact: FYVE domain containing protein 8.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ran GTPase binding protein, putative 5.973e-22
Internal
sp_v3.0_unigene53730 SustainPine v3.0 400
• AutoFact: RCC1 domain containing protein 3.0e-09
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene54007 SustainPine v3.0 95
• AutoFact: MATE efflux family protein [Arabidopsis thaliana] gb|AAL87319.1| unknown protein [Arabidopsis thaliana] gb|AAM91784.1| unknown protein [Arabidopsis thaliana] gb|AEE31561.1| MATE efflux family protein [Arabidopsis thaliana] 1.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multidrug resistance pump, putative 3.07e-33
Internal
sp_v3.0_unigene54034 SustainPine v3.0 321
• AutoFact: serine/threonine-protein kinase-like protein [Arabidopsis thaliana] sp|Q9SV05.1|CCR35_ARATH RecName: Full=Serine/threonine-protein kinase-like protein At3g51990; AltName: Full=CRINKLY 4-related kinase; Flags: Precursor emb|CAB41319.1| putative serine/thre 2.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene54253 SustainPine v3.0 463
• AutoFact: DNA damage-binding protein 1 n=5 Tax=core eudicotyledons RepID=DDB1_SOLCE 0.0
• FL-Next: sp=DNA damage-binding protein 1; cheesmanii). 0.0
Internal
sp_v3.0_unigene54521 SustainPine v3.0 476
• AutoFact: Laccase n=2 Tax=Pinus taeda RepID=Q9AUI3_PINTA 0.0
• FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
• Sma3: Laccase 1.714e-31
Internal
sp_v3.0_unigene54551 SustainPine v3.0 395
• AutoFact: 40S ribosomal protein S14 [Oryza sativa Indica Group] 4.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S14 2.258e-24
Putative Complete
sp_v3.0_unigene54634 SustainPine v3.0 208
• AutoFact: pfam01363, FYVE, FYVE zinc finger 9.0e-18
• FL-Next: tr=Putative ZR1 protein; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Ran GTPase binding protein, putative 4.093e-16
Internal
sp_v3.0_unigene54736 SustainPine v3.0 378
• AutoFact: putative transcription regulatory protein [Oryza sativa Japonica Group] gb|ABB47976.2| transcriptional regulator, putative, expressed [Oryza sativa Japonica Group] 4.0e-16
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene54820 SustainPine v3.0 370
• AutoFact: Unassigned protein
• FL-Next: tr=Small subunit processome component-like protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
• Sma3: Uncharacterized protein At4g30990.1 9.747e-06
Internal
sp_v3.0_unigene55540 SustainPine v3.0 318
• AutoFact: pfam00665, rve, Integrase core domain 3.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 7.377e-08
Internal
sp_v3.0_unigene55690 SustainPine v3.0 476
• AutoFact: Ubiquitin-protein ligase, putative n=1 Tax=Ricinus communis RepID=B9SSL4_RICCO 0.0
• FL-Next: sp=U-box domain-containing protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene56197 SustainPine v3.0 183
• AutoFact: Ran GTPase binding protein, putative n=1 Tax=Ricinus communis RepID=B9S8T2_RICCO 5.0e-10
• FL-Next: tr=Ran GTPase binding protein, putative; Ricinus communis (Castor bean). 0.0
• Sma3: Ran GTPase binding protein, putative 5.948e-10
Internal
sp_v3.0_unigene56337 SustainPine v3.0 333
• AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 4.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Expansin 0.0
Putative N-terminus
sp_v3.0_unigene56715 SustainPine v3.0 492
• AutoFact: DUF659 domain containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Internal
sp_v3.0_unigene56903 SustainPine v3.0 346
• AutoFact: DUF659 domain containing protein 5.60519e-45
• FL-Next: tr=Putative uncharacterized protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
• Sma3: HAT dimerisation domain-containing protein-like 4.034e-07
Internal
sp_v3.0_unigene57550 SustainPine v3.0 390
• AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 1.0e-24
• FL-Next: tr=Expansin; Pinus taeda (Loblolly pine). 0.0
• Sma3: Expansin 0.0
N-terminus
sp_v3.0_unigene57972 SustainPine v3.0 525
• AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 0.0
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 6.177e-29
Internal
sp_v3.0_unigene58002 SustainPine v3.0 267
• AutoFact: peptide methionine sulfoxide reductase msrB [Coprinopsis cinerea okayama7#130] gb|EAU90603.1| peptide methionine sulfoxide reductase msrB [Coprinopsis cinerea okayama7#130] 9.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Methionine sulfoxide reductase type 1.082e-10
Internal
sp_v3.0_unigene58593 SustainPine v3.0 235
• AutoFact: Protein pim1, putative n=1 Tax=Ricinus communis RepID=B9RRY8_RICCO 5.0e-09
• FL-Next: tr=Putative uncharacterized protein F15N18_170; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: cDNA clone:J033034G02, full insert sequence 8.772e-06
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain