Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Regulator of chromosome condensation, RCC1

Term: IPR000408  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene49115 SustainPine v3.0 262
• AutoFact: ATP binding protein, putative (Fragment) n=1 Tax=Ricinus communis RepID=B9SLN9_RICCO 4.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr10 scaffold_81, whole genome shotgun sequence 9.894e-13
Internal
sp_v3.0_unigene49290 SustainPine v3.0 258
• AutoFact: Exostosin domain containing protein 3.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Secondary cell wall-related glycosyltransferase family 47, putative, expressed 1.017e-08
Internal
sp_v3.0_unigene49341 SustainPine v3.0 381
• AutoFact: Putative expansin-A17 n=2 Tax=Arabidopsis RepID=EXP17_ARATH 9.80909e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Expansin 0.0
N-terminus
sp_v3.0_unigene49443 SustainPine v3.0 685
• AutoFact: Expansin 2 (Fragment) n=6 Tax=rosids RepID=B7U8J1_ZIZJJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Expansin 0.0
C-terminus
sp_v3.0_unigene49862 SustainPine v3.0 895
• AutoFact: Protein phosphatase 2c, putative n=1 Tax=Ricinus communis RepID=B9SG55_RICCO 7.00649e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein phosphatase 2c, putative 2.453e-15
Putative N-terminus
sp_v3.0_unigene49883 SustainPine v3.0 545
• AutoFact: FOG: RCC1 domain (ISS) [Ostreococcus tauri] emb|CAL51564.1| FOG: RCC1 domain (ISS) [Ostreococcus tauri] 1.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene49978 SustainPine v3.0 575
• AutoFact: Expansin 1 n=1 Tax=Musa acuminata RepID=Q8RVK4_MUSAC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Expansin 0.0
C-terminus
sp_v3.0_unigene50303 SustainPine v3.0 879
• AutoFact: kinase domain-containing protein [Arabidopsis thaliana] gb|AAL24403.1| Unknown protein [Arabidopsis thaliana] gb|AAN15471.1| Unknown protein [Arabidopsis thaliana] gb|AEE29481.1| kinase domain-containing protein [Arabidopsis thaliana] 1.4013e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine/threonine-protein kinase receptor 5.071e-11
C-terminus
sp_v3.0_unigene51063 SustainPine v3.0 273
• AutoFact: alpha-expansin 2 [Populus tremula x Populus tremuloides] 5.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Expansin 0.0
C-terminus
sp_v3.0_unigene51107 SustainPine v3.0 236
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein Sb02g031110; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
• Sma3: ARO1-like protein 1 7.121e-17
Internal
sp_v3.0_unigene51391 SustainPine v3.0 562
• AutoFact: Laccase n=2 Tax=Pinus taeda RepID=Q9AUI3_PINTA 0.0
• FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
• Sma3: Laccase 2.8026e-45
C-terminus
sp_v3.0_unigene51707 SustainPine v3.0 441
• AutoFact: Laccase n=1 Tax=Pinus taeda RepID=Q9AUI2_PINTA 9.0e-24
• FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
• Sma3: Laccase, putative 0.0
C-terminus
sp_v3.0_unigene51858 SustainPine v3.0 340
• AutoFact: Unassigned protein 1.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene52439 SustainPine v3.0 340
• AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 1.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Expansin 0.0
Putative N-terminus
sp_v3.0_unigene52632 SustainPine v3.0 293
• AutoFact: Tetratricopeptide-like helical [Medicago truncatula] 4.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Tetratricopeptide-like helical 7.203e-12
Internal
sp_v3.0_unigene52661 SustainPine v3.0 283
• AutoFact: putative receptor-like protein kinase [Oryza sativa Japonica Group] 8.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine/threonine-protein kinase receptor 8.782e-11
Internal
sp_v3.0_unigene53026 SustainPine v3.0 470
• AutoFact: Putative gag-pol polyprotein n=1 Tax=Fragaria x ananassa RepID=C6GFP7_FRAAN 6.0e-35
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 9.153e-16
Internal
sp_v3.0_unigene53159 SustainPine v3.0 352
• AutoFact: Expansin (Fragment) n=1 Tax=Solanum tuberosum RepID=D3YE72_SOLTU 5.0e-38
• FL-Next: tr=Expansin; Pinus taeda (Loblolly pine). 0.0
• Sma3: Expansin 0.0
Internal
sp_v3.0_unigene53354 SustainPine v3.0 411
• AutoFact: Laccase n=2 Tax=Pinus taeda RepID=Q9AUI3_PINTA 4.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Laccase 0.0
C-terminus
sp_v3.0_unigene53542 SustainPine v3.0 259
• AutoFact: DUF822 domain containing protein 7.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: BRASSINAZOLE-RESISTANT 1 protein, putative 1.057e-12
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain