Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Regulator of chromosome condensation, RCC1

Term: IPR000408  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene44426 SustainPine v3.0 1186
• AutoFact: Unassigned protein
• FL-Next: tr=WD repeat-containing protein, putative; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
N-terminus
sp_v3.0_unigene45004 SustainPine v3.0 155
• AutoFact: E3 ubiquitin ligase PUB14, putative n=1 Tax=Ricinus communis RepID=B9SUD5_RICCO 2.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene45106 SustainPine v3.0 222
• AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RI14_RICCO 1.0e-22
• FL-Next: sp=Probable LRR receptor-like serine/threonine-protein kinase At1g56140; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Putative Receptor-like serine/threonine kinase(RFK1) 1.659e-13
Internal
sp_v3.0_unigene45122 SustainPine v3.0 480
• AutoFact: adenine nucleotide alpha hydrolases-domain containing protein kinase [Arabidopsis thaliana] gb|AAL57632.1| At1g21590/F24J8_9 [Arabidopsis thaliana] gb|AAM98263.1| At1g21590/F24J8_9 [Arabidopsis thaliana] gb|AEE30121.1| adenine nucleotide alpha hydrolases- 8.40779e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP binding protein, putative 4.21e-13
Internal
sp_v3.0_unigene45185 SustainPine v3.0 182
• AutoFact: Ran GTPase binding protein, putative n=1 Tax=Ricinus communis RepID=B9T5E9_RICCO 3.0e-17
• FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
• Sma3: Ran GTPase binding protein, putative 7.269e-23
Internal
sp_v3.0_unigene45623 SustainPine v3.0 339
• AutoFact: DNA glycosylase n=2 Tax=Populus trichocarpa RepID=B9HW11_POPTR 6.99949e-42
• FL-Next: Isoform 2 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME 0.0
• Sma3: Repressor of silencing 1 1.526e-08
Internal
sp_v3.0_unigene46112 SustainPine v3.0 795
• AutoFact: DEAD-box ATP-dependent RNA helicase 35 [Arabidopsis thaliana] sp|Q9LU46.1|RH35_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 35 dbj|BAA97391.1| DEAD-box protein abstrakt [Arabidopsis thaliana] dbj|BAE98527.1| DEAD-box protein abstrakt [Arabidops 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 1.135e-19
C-terminus
sp_v3.0_unigene47351 SustainPine v3.0 346
• AutoFact: DEAD-box ATP-dependent RNA helicase 24 [Arabidopsis thaliana] sp|O22907.2|RH24_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 24 gb|AAL15330.1| At2g47330/T8I13.17 [Arabidopsis thaliana] gb|AAB63833.2| putative ATP-dependent RNA helicase [Arabidop 4.00001e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 24 1.008e-07
Putative C-terminus
sp_v3.0_unigene47503 SustainPine v3.0 605
• AutoFact: SHR5-receptor-like kinase [Saccharum hybrid cultivar SP70-1143] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP binding protein, putative 9.061e-15
Internal
sp_v3.0_unigene47755 SustainPine v3.0 2170
• AutoFact: Copine, putative n=1 Tax=Ricinus communis RepID=B9RAR5_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Copine, putative 1.213e-20
Complete
sp_v3.0_unigene47946 SustainPine v3.0 525
• AutoFact: elongator protein 2 [Arabidopsis thaliana] gb|AEE32440.1| elongator protein 2 [Arabidopsis thaliana] 8.40779e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene48002 SustainPine v3.0 373
• AutoFact: protein UV-B resistance 8 [Arabidopsis thaliana] dbj|BAB11034.1| UVB-resistance protein UVR8 [Arabidopsis thaliana] gb|AAM78089.1| AT5g63860/MGI19_6 [Arabidopsis thaliana] gb|AAN18169.1| At5g63860/MGI19_6 [Arabidopsis thaliana] gb|AED97805.1| protein UV-B 3.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene48023 SustainPine v3.0 813
• AutoFact: Copine I-like protein n=4 Tax=Oryza RepID=Q6YYC5_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Copine, putative 6.254e-17
N-terminus
sp_v3.0_unigene48068 SustainPine v3.0 471
• AutoFact: RCC1 repeat-containing protein [Myxococcus xanthus DK 1622] gb|ABF90088.1| RCC1 repeat domain protein [Myxococcus xanthus DK 1622] 8.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene48078 SustainPine v3.0 402
• AutoFact: Repressor of silencing 3 n=1 Tax=Nicotiana tabacum RepID=A4PF91_TOBAC 1.0e-22
• FL-Next: Isoform 1 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME 0.0
• Sma3: Repressor of silencing 1 1.408e-08
Internal
sp_v3.0_unigene48203 SustainPine v3.0 827
• AutoFact: putative zinc finger protein [Oryza sativa Japonica Group] gb|AAP54362.1| Zinc finger, C3HC4 type family protein, expressed [Oryza sativa Japonica Group] dbj|BAG95571.1| unnamed protein product [Oryza sativa Japonica Group] 6.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RHC1A 5.382e-21
C-terminus
sp_v3.0_unigene48368 SustainPine v3.0 379
• AutoFact: Ubiquitin-protein ligase, PUB13 n=2 Tax=Selaginella moellendorffii RepID=D8SNN8_SELML 5.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: E3 ubiquitin ligase PUB14, putative 2.609e-09
Internal
sp_v3.0_unigene48578 SustainPine v3.0 415
• AutoFact: Ran GTPase binding protein, putative n=1 Tax=Ricinus communis RepID=B9SJF7_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ran GTPase binding protein, putative 6.037e-22
Internal
sp_v3.0_unigene48692 SustainPine v3.0 250
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene48975 SustainPine v3.0 300
• AutoFact: Cytohesin 1, 2, 3, putative n=1 Tax=Ricinus communis RepID=B9RDE3_RICCO 0.0
• FL-Next: sp=Pattern formation protein EMB30; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Putative guanine nucleotide-exchange protein GEP2 1.006e-11
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain