Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Regulator of chromosome condensation, RCC1

Term: IPR000408  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene40535 SustainPine v3.0 867
• AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 0.0
• FL-Next: tr=Expansin; Pinus taeda (Loblolly pine). 0.0
• Sma3: Expansin 0.0
C-terminus
sp_v3.0_unigene40536 SustainPine v3.0 1066
• AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 0.0
• FL-Next: tr=Expansin; Pinus taeda (Loblolly pine). 0.0
• Sma3: Expansin 0.0
Complete
sp_v3.0_unigene40777 SustainPine v3.0 1034
• AutoFact: Ran gtpase binding protein (Fragment) n=1 Tax=Oryza sativa Indica Group RepID=A6N0Y2_ORYSI 4.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ran GTPase binding protein, putative 1.462e-19
C-terminus
sp_v3.0_unigene41396 SustainPine v3.0 680
• AutoFact: 4-coumarate--CoA ligase-like 5 n=3 Tax=Arabidopsis RepID=4CLL5_ARATH 5.99994e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene41612 SustainPine v3.0 156
• AutoFact: Pattern formation protein, putative n=1 Tax=Ricinus communis RepID=B9SVJ6_RICCO 6.0e-19
• FL-Next: sp=Pattern formation protein EMB30; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Pattern formation protein, putative 5.294e-12
Internal
sp_v3.0_unigene41666 SustainPine v3.0 283
• AutoFact: putative serine/threonine-protein kinase-like protein CCR3 [Arabidopsis thaliana] sp|Q9LY50.1|ACCR3_ARATH RecName: Full=Putative serine/threonine-protein kinase-like protein CCR3; AltName: Full=Protein CRINKLY 4 RELATED 3; Short=AtCRR3; Flags: Precursor e 2.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Receptor kinase-like protein 7.257e-06
Internal
sp_v3.0_unigene41779 SustainPine v3.0 824
• AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AAK62600.1| AT3g62770/F26K9_200 [Arabidopsis thaliana] gb|AAL15394.1| AT3g62770/F26K9_200 [Arabidopsis thaliana] gb|AEE80389.1| transducin/WD40 domain-containing protein [Arabidopsis thal 3.99931e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WD-repeat domain phosphoinositide-interacting protein 3 7.399e-09
Internal
sp_v3.0_unigene41791 SustainPine v3.0 1614
• AutoFact: DZC domain containing protein 2.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ran GTPase binding protein, putative 7.736e-10
Putative Complete
sp_v3.0_unigene41880 SustainPine v3.0 198
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative ripening regulated protein 2.789e-07
Internal
sp_v3.0_unigene41938 SustainPine v3.0 307
• AutoFact: putative threonyl-tRNA synthetase, putative / threonine--tRNA ligase [Arabidopsis thaliana] gb|AEC05873.1| putative threonyl-tRNA synthetase, putative / threonine--tRNA ligase [Arabidopsis thaliana] 5.99756e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene42288 SustainPine v3.0 1694
• AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA 0.0
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.022e-14
Putative N-terminus
sp_v3.0_unigene42427 SustainPine v3.0 1802
• AutoFact: fatty acyl-CoA reductase 1 [Arabidopsis thaliana] sp|Q39152.1|FACR1_ARATH RecName: Full=Fatty acyl-CoA reductase 1 emb|CAA68191.1| male sterility 2-like protein [Arabidopsis thaliana] dbj|BAB09122.1| male sterility 2-like protein [Arabidopsis thaliana] gb 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acyl CoA reductase 1.988e-12
Putative Complete
sp_v3.0_unigene42534 SustainPine v3.0 400
• AutoFact: pullulanase [Spinacia oleracea] 0.0
• FL-Next: sp=Pullulanase 1, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Starch debranching enzyme 2.999e-19
Internal
sp_v3.0_unigene42886 SustainPine v3.0 462
• AutoFact: exostosin family protein-like [Oryza sativa Japonica Group] dbj|BAD68245.1| exostosin family protein-like [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Exostosin-like 7.442e-14
Internal
sp_v3.0_unigene43144 SustainPine v3.0 128
• AutoFact: 4-coumarate--CoA ligase-like 7 [Arabidopsis thaliana] sp|Q9M0X9.1|4CLL7_ARATH RecName: Full=4-coumarate--CoA ligase-like 7; AltName: Full=4-coumarate--CoA ligase isoform 6; Short=At4CL6 emb|CAB81058.1| 4-coumarate--CoA ligase-like protein [Arabidopsis tha 3.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acyl:coa ligase 8.69e-08
Internal
sp_v3.0_unigene43297 SustainPine v3.0 128
• AutoFact: Guanine nucleotide exchange factor P532, putative n=1 Tax=Ricinus communis RepID=B9R8I6_RICCO 3.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene43427 SustainPine v3.0 128
• AutoFact: Protein ROS1, putative n=1 Tax=Ricinus communis RepID=B9SRG6_RICCO 7.0e-15
• FL-Next: Isoform 1 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME 0.0
• Sma3: Repressor of silencing 1 2.116e-08
Internal
sp_v3.0_unigene43448 SustainPine v3.0 214
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|O49399.2|PP321_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g18840 emb|CAA16741.2| putative protein [Arabidopsis thaliana] emb|CAB78886.1| putative protein [Arabid 6.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 6.471e-15
Internal
sp_v3.0_unigene43838 SustainPine v3.0 864
• AutoFact: Polygalacturonase n=1 Tax=Solanum lycopersicum RepID=Q9M7D3_SOLLC 1.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Polygalacturonase 0.0
C-terminus
sp_v3.0_unigene44211 SustainPine v3.0 644
• AutoFact: FOG: RCC1 domain (ISS) [Ostreococcus tauri] emb|CAL51564.1| FOG: RCC1 domain (ISS) [Ostreococcus tauri] 5.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain