Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Regulator of chromosome condensation, RCC1

Term: IPR000408  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene36974 SustainPine v3.0 3182
• AutoFact: putative transcription regulatory protein [Oryza sativa Japonica Group] gb|ABB47976.2| transcriptional regulator, putative, expressed [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Transcriptional regulator, putative, expressed 1.34e-13
C-terminus
sp_v3.0_unigene37012 SustainPine v3.0 3164
• AutoFact: protein phosphatase 2C (PP2C) [Fagus sylvatica] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein phosphatase 2c, putative 1.021e-17
Complete
sp_v3.0_unigene37026 SustainPine v3.0 2191
• AutoFact: Laccase 110a n=1 Tax=Populus trichocarpa RepID=B9HC76_POPTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Laccase 0.0
Complete
sp_v3.0_unigene37318 SustainPine v3.0 769
• AutoFact: Laccase n=1 Tax=Pinus taeda RepID=Q9AUI4_PINTA 0.0
• FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
• Sma3: Laccase, putative 0.0
C-terminus
sp_v3.0_unigene37428 SustainPine v3.0 978
• AutoFact: ARO1-like protein (Fragment) n=1 Tax=Pinus taeda RepID=B7FF15_PINTA 0.0
• FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
• Sma3: ARO1-like protein 1 7.585e-17
C-terminus
sp_v3.0_unigene37557 SustainPine v3.0 1010
• AutoFact: secondary cell wall-related glycosyltransferase family 47 [Populus tremula x Populus tremuloides] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Exostosin-like 1.271e-13
Internal
sp_v3.0_unigene37672 SustainPine v3.0 997
• AutoFact: Laccase n=1 Tax=Pinus taeda RepID=Q9AUI6_PINTA 0.0
• FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
• Sma3: Laccase, putative 0.0
C-terminus
sp_v3.0_unigene38160 SustainPine v3.0 1352
• AutoFact: DUF659 domain containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene38240 SustainPine v3.0 1548
• AutoFact: DUF659 domain containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene38577 SustainPine v3.0 971
• AutoFact: DUF659 domain containing protein 2.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene38724 SustainPine v3.0 2148
• AutoFact: Gag-Pol polyprotein n=4 Tax=Medicago truncatula RepID=B8YLY3_MEDTR 0.0
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 7.7e-24
C-terminus
sp_v3.0_unigene38725 SustainPine v3.0 496
• AutoFact: Putative polyprotein n=1 Tax=Solanum lycopersicum RepID=Q5GA69_SOLLC 0.0
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.496e-16
Internal
sp_v3.0_unigene38730 SustainPine v3.0 1382
• AutoFact: 4-coumarate-CoA ligase-like protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acyl:coa ligase 4.447e-38
C-terminus
sp_v3.0_unigene38785 SustainPine v3.0 2699
• AutoFact: Secondary cell wall-related glycosyltransferase family 47 n=1 Tax=Populus tremula x Populus tremuloides RepID=Q5BM99_9ROSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Exostosin-like 2.352e-10
Complete
sp_v3.0_unigene38891 SustainPine v3.0 1835
• AutoFact: putative receptor protein kinase PERK1 [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP binding protein, putative 1.01e-16
Complete
sp_v3.0_unigene38955 SustainPine v3.0 786
• AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] dbj|BAD42917.1| unnamed protein product [Arabidopsis thaliana] gb|AED96018.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Sma3: Predicted protein 0.0
C-terminus
sp_v3.0_unigene39643 SustainPine v3.0 678
• AutoFact: DEAD-box ATP-dependent RNA helicase 52B n=3 Tax=Oryza sativa RepID=RH52B_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 7.087e-14
Putative N-terminus
sp_v3.0_unigene39692 SustainPine v3.0 141
• AutoFact: transcription factor jumonji (jmjC) domain-containing protein [Arabidopsis thaliana] gb|AAK64062.1| putative RB-binding protein [Arabidopsis thaliana] gb|AAS46255.1| putative RB-binding protein [Arabidopsis thaliana] gb|AEE34105.1| transcription factor ju 3.0e-21
• FL-Next: Isoform 2 of Probable lysine-specific demethylase JMJ14 OS=Arabidopsis thaliana GN=JMJ14 0.0
• Sma3: Jumonji domain protein 3.228e-20
Internal
sp_v3.0_unigene39732 SustainPine v3.0 191
• AutoFact: putative serine/threonine kinase [Manihot esculenta] 3.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine/threonine-protein kinase receptor 1.956e-09
Internal
sp_v3.0_unigene40503 SustainPine v3.0 1206
• AutoFact: DUF659 domain containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DNA binding protein, putative 2.109e-08
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain