Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Regulator of chromosome condensation, RCC1

Term: IPR000408  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene32097 SustainPine v3.0 409
• AutoFact: AP2/ERF domain-containing transcription factor n=1 Tax=Populus trichocarpa RepID=A9PLA3_POPTR 1.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 2.29813e-43
N-terminus
sp_v3.0_unigene32376 SustainPine v3.0 821
• AutoFact: Dehydration-responsive element binding protein 3 n=1 Tax=Glycine max RepID=Q2VEU3_SOYBN 1.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 8.33773e-42
Complete
sp_v3.0_unigene32538 SustainPine v3.0 620
• AutoFact: 40S ribosomal protein S14 [Scophthalmus maximus] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S14 4.06e-24
Complete
sp_v3.0_unigene32745 SustainPine v3.0 593
• AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Expansin 0.0
N-terminus
sp_v3.0_unigene32926 SustainPine v3.0 707
• AutoFact: TINY transcription factor n=1 Tax=Arachis hypogaea RepID=E4W7U9_ARAHY 7.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 1.885e-28
Putative Complete
sp_v3.0_unigene33151 SustainPine v3.0 1387
• AutoFact: Laccase n=2 Tax=Pinus taeda RepID=Q9AUI3_PINTA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Laccase 0.0
C-terminus
sp_v3.0_unigene33168 SustainPine v3.0 581
• AutoFact: Alpha-expansin 8, putative n=1 Tax=Ricinus communis RepID=B9T3P8_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Expansin 0.0
N-terminus
sp_v3.0_unigene33417 SustainPine v3.0 363
• AutoFact: Cu-oxidase_2 domain containing protein 9.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Laccase 0.0
Internal
sp_v3.0_unigene34227 SustainPine v3.0 836
• AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 45 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 6.13e-08
Internal
sp_v3.0_unigene34436 SustainPine v3.0 496
• AutoFact: putative pattern formation protein EMB30 [Arabidopsis thaliana] 0.0
• FL-Next: sp=Pattern formation protein EMB30; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Pattern formation protein, putative 5.237e-08
Internal
sp_v3.0_unigene34532 SustainPine v3.0 631
• AutoFact: Expansin 2 n=1 Tax=Zinnia violacea RepID=Q9LLB2_ZINEL 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Expansin 0.0
C-terminus
sp_v3.0_unigene35010 SustainPine v3.0 2862
• AutoFact: putative relA/spoT homologous protein RSH2 [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative relA/spoT homologous protein RSH2 7.567e-09
C-terminus
sp_v3.0_unigene35190 SustainPine v3.0 2147
• AutoFact: mate efflux domain-containing protein [Arabidopsis thaliana] dbj|BAB10542.1| unnamed protein product [Arabidopsis thaliana] gb|AAK76728.1| unknown protein [Arabidopsis thaliana] gb|AAL85047.1| unknown protein [Arabidopsis thaliana] gb|AED96215.1| mate eff 0.0
• FL-Next: sp=MATE efflux family protein 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: TRANSPARENT TESTA 12 protein, putative 2.819e-37
Complete
sp_v3.0_unigene35549 SustainPine v3.0 413
• AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 0.0
• FL-Next: tr=Expansin; Pinus taeda (Loblolly pine). 0.0
• Sma3: Expansin 0.0
N-terminus
sp_v3.0_unigene35667 SustainPine v3.0 1033
• AutoFact: DEAD-box ATP-dependent RNA helicase 37 n=2 Tax=Oryza sativa Japonica Group RepID=RH37_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 2.076e-30
Internal
sp_v3.0_unigene35978 SustainPine v3.0 566
• AutoFact: MatE domain containing protein 1.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: TRANSPARENT TESTA 12 protein, putative 8.496e-30
C-terminus
sp_v3.0_unigene35986 SustainPine v3.0 756
• AutoFact: arm repeat protein [Oryza sativa Japonica Group] 8.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene36080 SustainPine v3.0 484
• AutoFact: AMP dependent CoA ligase, putative n=1 Tax=Ricinus communis RepID=B9R8J7_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acyl:coa ligase 3.86e-38
C-terminus
sp_v3.0_unigene36207 SustainPine v3.0 1202
• AutoFact: WRKY7-superfamily of TFs having WRKY and zinc finger domains n=1 Tax=Zea mays RepID=B6T167_MAIZE 9.0e-28
• FL-Next: sp=Probable WRKY transcription factor 50; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: WRKY transcription factor, putative 4.421e-18
Complete
sp_v3.0_unigene36562 SustainPine v3.0 980
• AutoFact: mate efflux domain-containing protein [Arabidopsis thaliana] dbj|BAB10542.1| unnamed protein product [Arabidopsis thaliana] gb|AAK76728.1| unknown protein [Arabidopsis thaliana] gb|AAL85047.1| unknown protein [Arabidopsis thaliana] gb|AED96215.1| mate eff 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: TRANSPARENT TESTA 12 protein, putative 1.698e-38
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain