Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Regulator of chromosome condensation, RCC1

Term: IPR000408  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene21810 SustainPine v3.0 871
• AutoFact: polygalacturonase [Citrus sinensis] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Polygalacturonase 0.0
C-terminus
sp_v3.0_unigene21825 SustainPine v3.0 917
• AutoFact: BNR repeat domain protein-like n=3 Tax=Oryza sativa RepID=Q8S160_ORYSJ 3.00018e-42
• FL-Next: tr=Uncharacterized protein; Zea mays (Maize). 0.0
C-terminus
sp_v3.0_unigene21940 SustainPine v3.0 389
• AutoFact: DEAD-box ATP-dependent RNA helicase 40 [Arabidopsis thaliana] sp|Q9SQV1.1|RH40_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 40 gb|AAF08584.1|AC011623_17 putative RNA helicase [Arabidopsis thaliana] gb|AEE74400.1| DEAD-box ATP-dependent RNA heli 8.0e-12
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase 40; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 14 2.985e-08
N-terminus
sp_v3.0_unigene22110 SustainPine v3.0 368
• AutoFact: AMP dependent CoA ligase, putative n=1 Tax=Ricinus communis RepID=B9RBM4_RICCO 2.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acyl:coa ligase 2.865e-36
C-terminus
sp_v3.0_unigene22196 SustainPine v3.0 613
• AutoFact: Serine-threonine protein kinase, plant-type, putative n=1 Tax=Ricinus communis RepID=B9SNX7_RICCO 5.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative Receptor-like serine/threonine kinase(RFK1) 1.123e-12
Internal
sp_v3.0_unigene22216 SustainPine v3.0 364
• AutoFact: Laccase n=2 Tax=Pinus taeda RepID=Q9AUI3_PINTA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Laccase, putative 0.0
Internal
sp_v3.0_unigene22246 SustainPine v3.0 931
• AutoFact: Laccase n=1 Tax=Pinus taeda RepID=Q9AUI6_PINTA 0.0
• FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
• Sma3: Laccase, putative 0.0
N-terminus
sp_v3.0_unigene22259 SustainPine v3.0 784
• AutoFact: Beta-carotene hydroxylase n=1 Tax=Carica papaya RepID=F1JTK4_CARPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta-carotene hydroxylase 0.0
C-terminus
sp_v3.0_unigene22914 SustainPine v3.0 1005
• AutoFact: putative receptor-like protein kinase [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative Receptor-like serine/threonine kinase(RFK1) 1.234e-12
Complete
sp_v3.0_unigene22985 SustainPine v3.0 1525
• AutoFact: Beta-carotene hydroxylase n=1 Tax=Carica papaya RepID=F1JTK4_CARPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta-carotene hydroxylase 0.0
Complete
sp_v3.0_unigene23068 SustainPine v3.0 512
• AutoFact: 4-coumarate-CoA ligase-like protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acyl:coa ligase 4.009e-38
Internal
sp_v3.0_unigene23233 SustainPine v3.0 2302
• AutoFact: [DZ] COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing proteins 4.0e-20
• FL-Next: tr=Uncharacterized protein; Brachypodium distachyon (Purple false brome) (Trachynia distachya). 0.0
Complete
sp_v3.0_unigene23286 SustainPine v3.0 435
• AutoFact: Alpha-expansin 11, putative n=1 Tax=Ricinus communis RepID=B9R8E5_RICCO 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Expansin 6.911e-31
Putative N-terminus
sp_v3.0_unigene23589 SustainPine v3.0 808
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Spotted leaf protein 11 1.873e-10
Putative C-terminus
sp_v3.0_unigene23914 SustainPine v3.0 2102
• AutoFact: DEAD-box ATP-dependent RNA helicase 5 n=2 Tax=Oryza sativa RepID=RH5_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 2.49e-22
Complete
sp_v3.0_unigene23928 SustainPine v3.0 447
• AutoFact: Fatty acyl-CoA reductase 2 n=5 Tax=Brassicaceae RepID=FACR2_ARATH 4.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Male sterility protein, putative 7.853e-16
Internal
sp_v3.0_unigene24746 SustainPine v3.0 587
• AutoFact: Isoform 3 of Aluminum-activated malate transporter 14 n=1 Tax=Arabidopsis thaliana RepID=Q9LS22-3 3.0e-20
• FL-Next: Isoform 3 of Aluminum-activated malate transporter 14 OS=Arabidopsis thaliana GN=ALMT14 0.0
• Sma3: Genomic DNA, chromosome 5, BAC clone:F10E10 1.901e-08
N-terminus
sp_v3.0_unigene24762 SustainPine v3.0 638
• AutoFact: Laccase-like multicopper oxidase 130 (Fragment) n=1 Tax=Ginkgo biloba RepID=Q693D1_GINBI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Laccase 0.0
Internal
sp_v3.0_unigene25047 SustainPine v3.0 1674
• AutoFact: SufE-like protein [Arabidopsis thaliana] sp|Q84W65.2|SUFE_ARATH RecName: Full=SufE-like protein, chloroplastic; AltName: Full=Protein EMBRYO DEFECTIVE 1374; Flags: Precursor emb|CAA18220.1| putative protein [Arabidopsis thaliana] emb|CAB79505.1| putative 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: UV-induced protein uvi31, putative 3.168e-09
Complete
sp_v3.0_unigene25150 SustainPine v3.0 446
• AutoFact: Laccase n=2 Tax=Pinus taeda RepID=Q9AUI3_PINTA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Laccase, putative 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain