Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: Regulator of chromosome condensation, RCC1

Term: IPR000408  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene17705 SustainPine v3.0 967
• AutoFact: Expansin 1 n=1 Tax=Musa acuminata RepID=Q8RVK4_MUSAC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Expansin 0.0
Putative Complete
sp_v3.0_unigene18000 SustainPine v3.0 2166
• AutoFact: Laccase n=2 Tax=Pinus taeda RepID=Q9AUI3_PINTA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Laccase, putative 0.0
Complete
sp_v3.0_unigene18606 SustainPine v3.0 843
• AutoFact: DEAD-box ATP-dependent RNA helicase 46 n=2 Tax=Arabidopsis RepID=F4K6V1_ARATH 6.0e-16
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase 46; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene18724 SustainPine v3.0 1627
• AutoFact: Protein kinase [Medicago truncatula] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glycogen synthase kinase-3 beta, putative 1.42e-12
Putative Complete
sp_v3.0_unigene18752 SustainPine v3.0 832
• AutoFact: Transcription factor (Fragment) n=1 Tax=Lycoris longituba RepID=D6MK34_9ASPA 8.0e-26
• FL-Next: tr=Transcription factor AP2; Taxus cuspidata (Japanese yew). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 6.043e-34
C-terminus
sp_v3.0_unigene19022 SustainPine v3.0 794
• AutoFact: UDP-glucosyltransferase, putative n=1 Tax=Ricinus communis RepID=B9SCH3_RICCO 2.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative glucosyltransferase 3.543e-06
Internal
sp_v3.0_unigene19086 SustainPine v3.0 407
• AutoFact: Pentatricopeptide, putative n=1 Tax=Oryza sativa Japonica Group RepID=Q10K51_ORYSJ 1.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide, putative 2.12e-12
N-terminus
sp_v3.0_unigene19223 SustainPine v3.0 414
• AutoFact: Ran GTPase binding protein, putative n=3 Tax=rosids RepID=B9SM24_RICCO 6.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ran GTPase binding protein, putative 2.885e-22
Internal
sp_v3.0_unigene19339 SustainPine v3.0 1904
• AutoFact: protein serine/arginine-rich 22 [Arabidopsis thaliana] ref|NP_001078474.1| protein serine/arginine-rich 22 [Arabidopsis thaliana] emb|CAA19765.1| RSZp22 splicing factor [Arabidopsis thaliana] gb|AAD12769.1| 9G8-like SR protein [Arabidopsis thaliana] emb|C 4.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Splicing factor, arginine/serine-rich 7 8.677e-15
Complete
sp_v3.0_unigene19461 SustainPine v3.0 774
• AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Expansin 0.0
C-terminus
sp_v3.0_unigene19540 SustainPine v3.0 585
• AutoFact: Gland-specific fatty acyl-CoA reductase 1 n=1 Tax=Artemisia annua RepID=E9KL86_ARTAN 1.96182e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Male sterility protein, putative 2.067e-15
Internal
sp_v3.0_unigene19573 SustainPine v3.0 351
• AutoFact: Laccase-like multicopper oxidase 130 (Fragment) n=1 Tax=Ginkgo biloba RepID=Q693D1_GINBI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Laccase 0.0
Internal
sp_v3.0_unigene20081 SustainPine v3.0 641
• AutoFact: [DZ] COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing proteins 7.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ran GTPase binding protein, putative 6.232e-22
Internal
sp_v3.0_unigene20228 SustainPine v3.0 872
• AutoFact: Acyl:coa ligase n=1 Tax=Populus trichocarpa RepID=B9H5E9_POPTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 4-coumarate--CoA ligase-like 4 2.166e-09
Putative N-terminus
sp_v3.0_unigene20701 SustainPine v3.0 1632
• AutoFact: DEAD-box ATP-dependent RNA helicase 37 [Arabidopsis thaliana] sp|Q84W89.2|RH37_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 37 gb|AAD23001.1| putative ATP-dependent RNA helicase [Arabidopsis thaliana] gb|AEC10133.1| DEAD-box ATP-dependent RNA h 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 2.676e-24
C-terminus
sp_v3.0_unigene20787 SustainPine v3.0 1194
• AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Expansin 0.0
Complete
sp_v3.0_unigene20846 SustainPine v3.0 1028
• AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Expansin 0.0
Putative Complete
sp_v3.0_unigene20847 SustainPine v3.0 676
• AutoFact: Copine III-like protein (Fragment) n=1 Tax=Picea abies RepID=B2KZF7_PICAB 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Copine, putative 9.771e-21
C-terminus
sp_v3.0_unigene21364 SustainPine v3.0 1289
• AutoFact: Atrophin-1 multi-domain protein 1.0e-28
• Sma3: Glycine-rich protein 1.328e-12
coding
sp_v3.0_unigene21763 SustainPine v3.0 1942
• AutoFact: ATP-dependent RNA helicase [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 13 1.767e-08
Complete

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain