Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: RNA-metabolising metallo-beta-lactamase

Term: IPR011108  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene72654 SustainPine v3.0 229
AutoFact: Calmodulin-binding heat-shock protein, putative n=1 Tax=Ricinus communis RepID=B9RIW9_RICCO 3.0e-24
FL-Next: tr=Calmodulin-binding heat-shock protein, putative; Ricinus communis (Castor bean). 0.0
Sma3: Calmodulin-binding heat-shock protein 3.383e-17
Internal
sp_v3.0_unigene73861 SustainPine v3.0 418
AutoFact: putative metallo beta subunit lactamase [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative metallo beta subunit lactamase; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene77732 SustainPine v3.0 253
AutoFact: putative cleavage and polyadenylation specificity factor [Arabidopsis thaliana] 1.0e-38
FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 3-I; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Chromosome chr12 scaffold_78, whole genome shotgun sequence 7.327e-06
Internal
sp_v3.0_unigene80752 SustainPine v3.0 245
AutoFact: putative cleavage and polyadenylation specificity factor [Arabidopsis thaliana] 8.0e-25
FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 3-I; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene94823 SustainPine v3.0 1060
AutoFact: Calmodulin-binding heat-shock protein, putative n=1 Tax=Ricinus communis RepID=B9RIW9_RICCO 0.0
FL-Next: tr=Calmodulin-binding heat-shock protein, putative; Ricinus communis (Castor bean). 0.0
Sma3: Calmodulin-binding heat-shock protein 5.987e-17
N-terminus
sp_v3.0_unigene99032 SustainPine v3.0 276
AutoFact: RNA-metabolising metallo-beta-lactamase family protein [Arabidopsis thaliana] gb|AAO42228.1| unknown protein [Arabidopsis thaliana] dbj|BAD93952.1| putative protein [Arabidopsis thaliana] gb|AED97746.1| RNA-metabolising metallo-beta-lactamase family prote 5.0e-33
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal
sp_v3.0_unigene102312 SustainPine v3.0 1287
AutoFact: putative cleavage and polyadenylation specificity factor [Arabidopsis thaliana] 0.0
FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 3-I; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Chromosome chr12 scaffold_78, whole genome shotgun sequence 3.733e-08
N-terminus
sp_v3.0_unigene104003 SustainPine v3.0 489
AutoFact: RNA-metabolising metallo-beta-lactamase family protein [Arabidopsis thaliana] gb|AAO42228.1| unknown protein [Arabidopsis thaliana] dbj|BAD93952.1| putative protein [Arabidopsis thaliana] gb|AED97746.1| RNA-metabolising metallo-beta-lactamase family prote 0.0
FL-Next: tr=Putative uncharacterized protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene105394 SustainPine v3.0 306
AutoFact: RINT-1 / TIP-1 domain-containing MAG2 protein [Arabidopsis thaliana] emb|CAB41853.1| putative protein [Arabidopsis thaliana] gb|AEE78320.1| RINT-1 / TIP-1 domain-containing MAG2 protein [Arabidopsis thaliana] 7.0e-26
FL-Next: tr=Chromosome structural maintenance protein-like; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene106093 SustainPine v3.0 384
AutoFact: calmodulin-binding heat shock protein [Gossypium hirsutum] 5.0e-26
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Sma3: Calmodulin-binding heat-shock protein, putative 8.233e-09
Internal
sp_v3.0_unigene114316 SustainPine v3.0 455
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative N-terminus
sp_v3.0_unigene115757 SustainPine v3.0 478
AutoFact: putative cleavage and polyadenylation specificity factor [Arabidopsis thaliana] 0.0
FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 3-I; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene122703 SustainPine v3.0 359
AutoFact: EMB2746 n=5 Tax=Arabidopsis RepID=D7MP09_ARALL 0.0
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene123221 SustainPine v3.0 282
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene123384 SustainPine v3.0 186
AutoFact: putative metallo beta subunit lactamase [Oryza sativa Japonica Group] 1.0e-19
FL-Next: tr=Putative uncharacterized protein Sb04g005900; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Internal
sp_v3.0_unigene138455 SustainPine v3.0 724
AutoFact: Ring zinc finger protein-like n=1 Tax=Oryza sativa Japonica Group RepID=Q6EPF2_ORYSJ 5.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative cleavage and polyadenylation specifity factor 9.374e-08
N-terminus
sp_v3.0_unigene141761 SustainPine v3.0 284
AutoFact: Cleavage and polyadenylation specificity factor subunit 3-I n=2 Tax=Arabidopsis RepID=CPSF3_ARATH 8.0e-17
FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 3-I; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene148561 SustainPine v3.0 230
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
C-terminus
sp_v3.0_unigene161771 SustainPine v3.0 352
AutoFact: putative cleavage and polyadenylation specificity factor [Arabidopsis thaliana] 7.0e-16
FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 3-I; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene185724 SustainPine v3.0 375
AutoFact: Cleavage and polyadenylation specificity factor, 73 kDa subunit n=2 Tax=Andropogoneae RepID=B6U1D4_MAIZE 1.0e-19
FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 3-I; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative cleavage and polyadenylation specificity factor 73 kDa subunit 5.848e-06
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain