Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: T-complex protein 1, beta subunit

Term: IPR012716  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene3551 SustainPine v3.0 2327
AutoFact: TCP domain class transcription factor n=1 Tax=Malus x domestica RepID=D9ZJD1_MALDO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr18 scaffold_1, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene26144 SustainPine v3.0 424
AutoFact: TCP-1/cpn60 chaperonin family protein n=1 Tax=Tetrahymena thermophila RepID=UPI00006CBCCD 0.0
FL-Next: sp=T-complex protein 1 subunit delta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: T-complex protein 1, beta subunit 1.229e-08
Putative N-terminus
sp_v3.0_unigene61304 SustainPine v3.0 335
AutoFact: PREDICTED: similar to chaperonin n=1 Tax=Nasonia vitripennis RepID=UPI00015B57CA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: T-complex protein 1, alpha subunit 1.013e-39
Internal
sp_v3.0_unigene71951 SustainPine v3.0 173
AutoFact: Chaperonin containing t-complex protein 1, beta subunit, tcpb, putative n=1 Tax=Ricinus communis RepID=B9R8I3_RICCO 4.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: T-complex protein 1, alpha subunit 4.149e-25
Internal
sp_v3.0_unigene75208 SustainPine v3.0 405
AutoFact: T-complex protein 1 subunit delta n=1 Tax=Physarum polycephalum RepID=Q8T5T6_PHYPO 1.0e-37
FL-Next: sp=T-complex protein 1 subunit delta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: T-complex protein 1, delta subunit 0.0
N-terminus
sp_v3.0_unigene150527 SustainPine v3.0 344
AutoFact: Chaperonin subunit 2 n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9CHM6_9EUKA 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: T-complex protein 1, beta subunit 1.317e-08
Putative C-terminus
sp_v3.0_unigene155748 SustainPine v3.0 559
AutoFact: T-complex protein 1 subunit beta n=2 Tax=Dictyostelium RepID=TCPB_DICDI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: T-complex protein 1, beta subunit 1.317e-08
Putative N-terminus
sp_v3.0_unigene158972 SustainPine v3.0 201
AutoFact: T-complex protein 1 subunit beta n=2 Tax=Dictyostelium RepID=TCPB_DICDI 2.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene159308 SustainPine v3.0 90
AutoFact: CCT chaperonin beta subunit n=1 Tax=Physarum polycephalum RepID=Q8WSY6_PHYPO 6.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene191280 SustainPine v3.0 324
AutoFact: Chaperonin containing TCP1 eta subunit n=1 Tax=Polysphondylium pallidum RepID=D3BPJ6_POLPA 2.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: T-complex protein 1, alpha subunit 4.265e-24
N-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain