Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: CRM1 C-terminal domain

Term: IPR014877  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene2935 SustainPine v3.0 4364
AutoFact: exportin 1A [Arabidopsis thaliana] emb|CAB56597.1| Exportin1 (XPO1) protein [Arabidopsis thaliana] emb|CAB89280.1| Exportin1 (XPO1) protein [Arabidopsis thaliana] emb|CAC01715.1| Exportin1 (XPO1) protein [Arabidopsis thaliana] gb|AAL07205.1| putative expo 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene13652 SustainPine v3.0 867
AutoFact: Unassigned protein
FL-Next: tr=WD repeat and FYVE domain-containing protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Internal
sp_v3.0_unigene21118 SustainPine v3.0 724
AutoFact: Chain B, Localization Of The Small Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome gb|AAM92710.1| putative 40S ribosomal protein S3 [Triticum aestivum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S3 1.195e-10
Putative N-terminus
sp_v3.0_unigene21266 SustainPine v3.0 963
AutoFact: 40S ribosomal protein S3-1 [Arabidopsis thaliana] sp|Q9SIP7.1|RS31_ARATH RecName: Full=40S ribosomal protein S3-1 gb|AAK55690.1|AF378887_1 At2g31610/T9H9.13 [Arabidopsis thaliana] gb|AAD24852.1| 40S ribosomal protein; contains C-terminal domain [Arabidops 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S3 1.23e-10
Complete
sp_v3.0_unigene26215 SustainPine v3.0 451
AutoFact: Ribosomal protein S3e n=2 Tax=Coleoptera RepID=Q4GXR1_SCALT 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S3 1.019e-10
N-terminus
sp_v3.0_unigene33049 SustainPine v3.0 854
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QXM6_ORYSJ 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.447e-16
C-terminus
sp_v3.0_unigene51652 SustainPine v3.0 464
AutoFact: Gag-pol polyprotein n=7 Tax=Glycine max RepID=Q84VH6_SOYBN 9.0e-38
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 4.407e-34
C-terminus
sp_v3.0_unigene51841 SustainPine v3.0 240
AutoFact: RVT_2 domain containing protein 2.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 9.67e-13
Putative N-terminus
sp_v3.0_unigene56333 SustainPine v3.0 493
AutoFact: Sec39 domain containing protein 5.0e-24
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene62049 SustainPine v3.0 245
AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q6I578_ORYSJ 2.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 0.0
Internal
sp_v3.0_unigene62811 SustainPine v3.0 241
AutoFact: Putative retroelement n=1 Tax=Oryza sativa Japonica Group RepID=Q94I65_ORYSJ 6.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.497e-35
Putative N-terminus
sp_v3.0_unigene64897 SustainPine v3.0 154
AutoFact: Orf490 protein n=4 Tax=Oryza RepID=Q8HCR1_ORYSJ 4.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.205e-36
Internal
sp_v3.0_unigene73695 SustainPine v3.0 500
AutoFact: Sec39 domain containing protein 2.0e-07
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene74308 SustainPine v3.0 248
AutoFact: rve domain containing protein 1.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Gag-Pol polyprotein 6.235e-07
Internal
sp_v3.0_unigene93545 SustainPine v3.0 1480
AutoFact: exportin 1A [Arabidopsis thaliana] emb|CAB56597.1| Exportin1 (XPO1) protein [Arabidopsis thaliana] emb|CAB89280.1| Exportin1 (XPO1) protein [Arabidopsis thaliana] emb|CAC01715.1| Exportin1 (XPO1) protein [Arabidopsis thaliana] gb|AAL07205.1| putative expo 0.0
FL-Next: tr=Chromosome region maintenance protein 1/exportin, putative; Ricinus communis (Castor bean). 0.0
Putative N-terminus
sp_v3.0_unigene98724 SustainPine v3.0 1022
AutoFact: Cleavage and polyadenylation specificity factor subunit 1 n=2 Tax=Arabidopsis RepID=CPSF1_ARATH 0.0
FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Probable cleavage and polyadenylation specificity factor subunit 1 1.656e-09
Internal
sp_v3.0_unigene123926 SustainPine v3.0 302
AutoFact: Cleavage and polyadenylation specificity factor subunit 1 n=2 Tax=Arabidopsis RepID=CPSF1_ARATH 3.0e-30
FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Probable cleavage and polyadenylation specificity factor subunit 1 1.248e-09
Internal
sp_v3.0_unigene144211 SustainPine v3.0 662
AutoFact: Chain B, Localization Of The Small Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome gb|AAM92710.1| putative 40S ribosomal protein S3 [Triticum aestivum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S3 1.218e-10
Complete
sp_v3.0_unigene144598 SustainPine v3.0 847
AutoFact: PREDICTED: 40S ribosomal protein S3-like n=1 Tax=Pongo abelii RepID=UPI0001D5E2D3 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S3, putative 2.319e-08
Complete
sp_v3.0_unigene147997 SustainPine v3.0 487
AutoFact: Integrase n=2 Tax=Beta vulgaris RepID=A2I5F8_BETVU 4.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, unclassified 8.48e-28
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain