Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: Pentatricopeptide repeat

Term: IPR002885  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene15897 SustainPine v3.0 1876
• AutoFact: Pectin lyase-like protein n=2 Tax=Arabidopsis RepID=Q9CAL5_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Polygalacturonase 0.0
Complete
sp_v3.0_unigene15903 SustainPine v3.0 1006
• AutoFact: LYR family of Fe/S cluster biogenesis protein [Arabidopsis thaliana] gb|AAU15177.1| At1g76060 [Arabidopsis thaliana] gb|AEE35791.1| LYR family of Fe/S cluster biogenesis protein [Arabidopsis thaliana] 1.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene15926 SustainPine v3.0 898
• AutoFact: proton gradient regulation 3 [Arabidopsis thaliana] sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g31850, chloroplastic; AltName: Full=Protein PROTON GRADIENT REGULATION 3; Flags: Precursor emb|CAB40755.1| putative p 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Misassembled
sp_v3.0_unigene15957 SustainPine v3.0 901
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LYZ9.1|PP362_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g02860 emb|CAB86040.1| putative protein [Arabidopsis thaliana] gb|AED90528.1| pentatricopeptide repeat- 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene16117 SustainPine v3.0 573
• AutoFact: GDSL-lipase 1 (Fragment) n=1 Tax=Capsicum annuum RepID=Q0R4F7_CAPAN 3.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Zinc finger protein, putative 1.382e-22
Putative N-terminus
sp_v3.0_unigene16239 SustainPine v3.0 335
• AutoFact: Pentatricopeptide repeat protein n=1 Tax=Gossypium hirsutum RepID=D2STE6_GOSHI 4.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene16345 SustainPine v3.0 520
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|O64766.1|PP185_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g35030, mitochondrial; Flags: Precursor gb|AAC12843.1| hypothetical protein [Arabidopsis thaliana] gb|A 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 7.683e-23
Internal
sp_v3.0_unigene16370 SustainPine v3.0 247
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein At3g23330 dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76753.1| pentatric 1.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene16445 SustainPine v3.0 641
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|O64624.1|PP163_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g18940 gb|AAC09028.1| putative salt-inducible protein [Arabidopsis thaliana] gb|AAL10489.1| At2g18940/F 9.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene16499 SustainPine v3.0 652
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SJJ1_RICCO 8.96831e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 1.08e-20
Internal
sp_v3.0_unigene16526 SustainPine v3.0 737
• AutoFact: RecName: Full=Cytochrome P450 704C1; AltName: Full=Cytochrome P450 CYPD gb|AAX07434.1| cytochrome P450 CYPD [Pinus taeda] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cytochrome P450 7.204e-23
C-terminus
sp_v3.0_unigene16560 SustainPine v3.0 638
• AutoFact: Cytochrome P450 A n=1 Tax=Capsicum annuum RepID=E3UTN3_CAPAN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cytochrome P450 2.796e-20
N-terminus
sp_v3.0_unigene16638 SustainPine v3.0 378
• AutoFact: Tetratricopeptide-like helical n=1 Tax=Medicago truncatula RepID=Q1SN04_MEDTR 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 1.812e-07
Internal
sp_v3.0_unigene16642 SustainPine v3.0 601
• AutoFact: PPR-repeat protein-like n=3 Tax=Oryza sativa RepID=Q94E87_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 2.926e-09
Internal
sp_v3.0_unigene16650 SustainPine v3.0 734
• AutoFact: CBL-interacting protein kinase 04 n=2 Tax=Selaginella moellendorffii RepID=C4P7R6_SELML 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: CBL-interacting serine/threonine-protein kinase, putative 1.71295e-41
Putative N-terminus
sp_v3.0_unigene16676 SustainPine v3.0 683
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein At3g23330 dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76753.1| pentatric 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 1.287e-15
Internal
sp_v3.0_unigene16684 SustainPine v3.0 377
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q84J46.1|PP262_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g29290; AltName: Full=Protein EMBRYO DEFECTIVE 2076 gb|AAO42091.1| unknown protein [Arabidopsis thalian 1.0e-08
• FL-Next: sp=Pentatricopeptide repeat-containing protein At3g29290; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Os03g0211600 protein 3.899e-06
Internal
sp_v3.0_unigene16703 SustainPine v3.0 403
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 2.144e-11
Internal
sp_v3.0_unigene16705 SustainPine v3.0 807
• AutoFact: MtN3_slv domain containing protein 4.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cytochrome c oxidoreductase 1.765e-12
Putative Complete
sp_v3.0_unigene16737 SustainPine v3.0 958
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain