Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Pentatricopeptide repeat

Term: IPR002885  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene143069 SustainPine v3.0 294
AutoFact: Secretory carrier membrane protein n=1 Tax=Elaeis guineensis RepID=B3TLU6_ELAGV 2.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SC3 protein 7.166e-26
Internal
sp_v3.0_unigene143090 SustainPine v3.0 406
AutoFact: Unassigned protein 9.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene143171 SustainPine v3.0 566
AutoFact: Chalcone synthase homolog PrChS1 n=1 Tax=Pinus radiata RepID=O24484_PINRA 0.0
FL-Next: tr=Chalcone synthase homolog PrChS1; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: Chs-like protein 2.765e-12
C-terminus
sp_v3.0_unigene143172 SustainPine v3.0 825
AutoFact: Eukaryotic translation initiation factor 5A 2 n=3 Tax=Picea RepID=Q3ZDK4_PICAB 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Eukaryotic translation initiation factor 5A 6.397e-28
Putative Complete
sp_v3.0_unigene143267 SustainPine v3.0 660
AutoFact: Calreticulin n=2 Tax=Pinaceae RepID=Q9FYV2_PINTA 0.0
FL-Next: tr=Calreticulin; Pinus taeda (Loblolly pine). 0.0
Sma3: Calreticulin 0.0
Putative N-terminus
sp_v3.0_unigene143295 SustainPine v3.0 268
AutoFact: pentatricopeptide, putative [Oryza sativa Japonica Group] gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group] 2.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 1.365e-26
C-terminus
sp_v3.0_unigene143321 SustainPine v3.0 509
AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Picea abies RepID=B3U1V1_PICAB 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 0.0
C-terminus
sp_v3.0_unigene143381 SustainPine v3.0 446
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600 gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana] gb|AEC06244.1| pentatricopeptide repe 2.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene143499 SustainPine v3.0 502
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g57430, chloroplastic; Flags: Precursor gb|AEE79654.1| pentatricopeptide repeat-containing protein [Ara 1.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 1.659e-31
C-terminus
sp_v3.0_unigene143564 SustainPine v3.0 465
AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Cycas revoluta RepID=B3U1U9_CYCRE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 4.16186e-43
Internal
sp_v3.0_unigene143952 SustainPine v3.0 374
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide (PPR) repeat-containing protein-like 4.621e-08
C-terminus
sp_v3.0_unigene144093 SustainPine v3.0 480
AutoFact: putative magnesium/proton exchanger [Oryza sativa Japonica Group] dbj|BAD25799.1| putative magnesium/proton exchanger [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Magnesium/proton exchanger 1; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene144211 SustainPine v3.0 662
AutoFact: Chain B, Localization Of The Small Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome gb|AAM92710.1| putative 40S ribosomal protein S3 [Triticum aestivum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S3 1.218e-10
Complete
sp_v3.0_unigene144345 SustainPine v3.0 318
AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Cycas revoluta RepID=B3U1U9_CYCRE 2.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 0.0
Internal
sp_v3.0_unigene144598 SustainPine v3.0 847
AutoFact: PREDICTED: 40S ribosomal protein S3-like n=1 Tax=Pongo abelii RepID=UPI0001D5E2D3 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S3, putative 2.319e-08
Complete
sp_v3.0_unigene144609 SustainPine v3.0 266
AutoFact: Chalcone synthase homolog PrChS1 n=1 Tax=Pinus radiata RepID=O24484_PINRA 2.0e-22
FL-Next: tr=Chalcone synthase homolog PrChS1; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: Chs-like protein 7.34e-09
Internal
sp_v3.0_unigene144715 SustainPine v3.0 475
AutoFact: CBL-interacting protein kinase 25 n=6 Tax=Populus RepID=A0MNL1_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: CBL-interacting serine/threonine-protein kinase, putative 1.292e-34
Internal
sp_v3.0_unigene144880 SustainPine v3.0 508
AutoFact: nodulin MtN3-like protein [Arabidopsis thaliana] sp|Q8LBF7.1|SWET7_ARATH RecName: Full=Bidirectional sugar transporter SWEET7; Short=AtSWEET7 gb|AAM64793.1| contains similarity to Medicago truncatula MtN3 (GB:Y08726) [Arabidopsis thaliana] gb|ABK32158.1| 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Seven-transmembrane-domain protein 1 2.095e-16
Putative N-terminus
sp_v3.0_unigene145542 SustainPine v3.0 1135
AutoFact: protein alfin-like 6 [Arabidopsis thaliana] gb|AAM15031.1| putative PHD-type zinc finger protein [Arabidopsis thaliana] gb|AAO41953.1| putative PHD-type zinc finger protein [Arabidopsis thaliana] gb|AAO50537.1| putative PHD-type zinc finger protein [Arabi 7.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: PHD finger protein 1.746e-29
Putative Complete
sp_v3.0_unigene145635 SustainPine v3.0 573
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9R809_RICCO 1.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain