Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Pentatricopeptide repeat

Term: IPR002885  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene141361 SustainPine v3.0 433
• AutoFact: putative callose synthase 1 catalytic subunit [Oryza sativa Japonica Group] 0.0
• FL-Next: sp=Callose synthase 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: 1,3-beta-glucan synthase 1.93239e-42
Internal
sp_v3.0_unigene141755 SustainPine v3.0 337
• AutoFact: MtN3_slv domain containing protein 6.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cytochrome c oxidoreductase 2.355e-12
Internal
sp_v3.0_unigene141776 SustainPine v3.0 358
• AutoFact: UDP-glucoronosyl/UDP-glucosyl transferase family protein 5.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene141959 SustainPine v3.0 516
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide, putative, expressed 5.73e-08
Putative N-terminus
sp_v3.0_unigene141980 SustainPine v3.0 337
• AutoFact: Pentatricopeptide repeat protein 79 (Fragment) n=2 Tax=Funariaceae RepID=F5CAE5_FUNHY 3.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 4.077e-16
Internal
sp_v3.0_unigene142006 SustainPine v3.0 368
• AutoFact: Pentatricopeptide repeat protein 65 n=2 Tax=Funariaceae RepID=F5CAD8_FUNHY 5.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene142202 SustainPine v3.0 336
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q8VYR5.1|PP351_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g35850, mitochondrial; Flags: Precursor gb|AAL49827.1| unknown protein [Arabidopsis thaliana] gb|AAM142 4.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Os05g0145600 protein 7.797e-06
N-terminus
sp_v3.0_unigene142207 SustainPine v3.0 383
• AutoFact: Pentatricopeptide repeat protein 78 (Fragment) n=1 Tax=Funaria hygrometrica RepID=F5CAE0_FUNHY 4.00001e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 0.0
C-terminus
sp_v3.0_unigene142233 SustainPine v3.0 427
• AutoFact: Early-responsive to dehydration stress protein (Fragment) n=1 Tax=Picea abies RepID=Q3ZDK3_PICAB 1.0e-36
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: ERD4 protein 2.695e-09
Internal
sp_v3.0_unigene142251 SustainPine v3.0 1294
• AutoFact: Calreticulin n=2 Tax=Pinaceae RepID=Q9FYV2_PINTA 0.0
• FL-Next: tr=Calreticulin; Pinus taeda (Loblolly pine). 0.0
• Sma3: Calreticulin 1.23174e-42
N-terminus
sp_v3.0_unigene142470 SustainPine v3.0 450
• AutoFact: PREDICTED: similar to Tetratricopeptide-like helical n=1 Tax=Vitis vinifera RepID=UPI0001984A05 2.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide, putative, expressed 6.611e-08
C-terminus
sp_v3.0_unigene142484 SustainPine v3.0 320
• AutoFact: Pentatricopeptide, putative n=3 Tax=Oryza sativa RepID=Q10MA5_ORYSJ 2.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene142600 SustainPine v3.0 754
• AutoFact: Calreticulin n=2 Tax=Pinaceae RepID=Q9FYV2_PINTA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Calreticulin 0.0
N-terminus
sp_v3.0_unigene142603 SustainPine v3.0 332
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g30700; AltName: Full=Protein DYW9 emb|CAB52443.1| putative protein [Arabidopsis thaliana] emb|CAB79788 2.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene142632 SustainPine v3.0 473
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9FZD1.1|PPR58_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g26460, mitochondrial; Flags: Precursor gb|AAF98572.1|AC013427_15 Contains similarity to a hypothetical 4.0e-39
• FL-Next: sp=Pentatricopeptide repeat-containing protein At1g26460, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene142682 SustainPine v3.0 200
• AutoFact: putative pentatricopeptide (PPR) repeat-containing protein [Oryza sativa Japonica Group] 4.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene142695 SustainPine v3.0 416
• AutoFact: CBL-interacting protein kinase 25 n=6 Tax=Populus RepID=A0MNL1_POPTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: CBL-interacting serine/threonine-protein kinase, putative 3.23e-31
Internal
sp_v3.0_unigene142750 SustainPine v3.0 485
• AutoFact: cholinephosphate cytidylyltransferase [Pisum sativum] 1.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Choline-phosphate cytidylyltransferase B 1.372e-12
Internal
sp_v3.0_unigene142785 SustainPine v3.0 368
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RDL5_RICCO 6.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Tetratricopeptide-like helical 7.015e-07
Putative C-terminus
sp_v3.0_unigene142900 SustainPine v3.0 466
• AutoFact: calreticulin [Arabidopsis thaliana] 4.99997e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Calreticulin 2.67648e-43
Misassembled

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain