Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: Pentatricopeptide repeat

Term: IPR002885  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene12701 SustainPine v3.0 2586
AutoFact: pfam02364, Glucan_synthase, 1,3-beta-glucan synthase component 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 1,3-beta-glucan synthase 2.387e-37
Complete
sp_v3.0_unigene12783 SustainPine v3.0 1093
AutoFact: [Q] COG2124 Cytochrome P450 3.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Flavonoid 3',5'-hydroxylase 3.55e-25
C-terminus
sp_v3.0_unigene12858 SustainPine v3.0 680
AutoFact: Bidirectional sugar transporter SWEET16 n=2 Tax=Oryza sativa RepID=SWT16_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Seven-transmembrane-domain protein 1 5.077e-14
Putative Complete
sp_v3.0_unigene13039 SustainPine v3.0 2421
AutoFact: MATE efflux family protein [Arabidopsis thaliana] sp|Q9SYD6.2|MATE1_ARATH RecName: Full=MATE efflux family protein 1; AltName: Full=Aluminum-activated citrate transporter; AltName: Full=FRD-like protein; AltName: Full=MATE citrate transporter; AltName: Fu 0.0
FL-Next: sp=MATE efflux family protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA-damage-inducible protein f, putative 1.424e-24
Putative Complete
sp_v3.0_unigene13058 SustainPine v3.0 2624
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RQZ0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene13064 SustainPine v3.0 634
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230 gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 4.268e-31
C-terminus
sp_v3.0_unigene13239 SustainPine v3.0 815
AutoFact: Gag and Pol n=1 Tax=Zea mays RepID=Q8LSK0_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 0.0
N-terminus
sp_v3.0_unigene13250 SustainPine v3.0 401
AutoFact: Os02g0565400 protein (Fragment) n=4 Tax=Oryza sativa RepID=Q0E0A8_ORYSJ 3.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene13301 SustainPine v3.0 1035
AutoFact: Flavonoid 3'5'-hydroxylase n=1 Tax=Phalaenopsis hybrid cultivar RepID=Q3YAF0_9ASPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: P-coumarate 3-hydroxylase 4.633e-11
C-terminus
sp_v3.0_unigene13446 SustainPine v3.0 695
AutoFact: 1,3-beta-glucan synthase component-like [Oryza sativa Japonica Group] dbj|BAC01168.1| 1,3-beta-glucan synthase component-like [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Callose synthase 12; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: 1,3-beta-glucan synthase 1.021e-37
Internal
sp_v3.0_unigene13504 SustainPine v3.0 3034
AutoFact: putative protein kinase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cyclin dependent kinase 1.791e-13
C-terminus
sp_v3.0_unigene13562 SustainPine v3.0 1279
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9C9A2.1|PP112_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g71060, mitochondrial; Flags: Precursor gb|AAG51696.1|AC016972_15 hypothetical protein; 31939-30407 [Ar 2.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene13631 SustainPine v3.0 798
AutoFact: putative pentatricopeptide repeat protein [Gossypium hirsutum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 1.181e-17
Internal
sp_v3.0_unigene13636 SustainPine v3.0 1101
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SQC8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene13703 SustainPine v3.0 2276
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9ZUY1.2|PP173_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27800, mitochondrial; Flags: Precursor gb|AEC08046.1| pentatricopeptide repeat-containing protein [Ara 0.0
FL-Next: sp=Pentatricopeptide repeat-containing protein At2g27800, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene13795 SustainPine v3.0 838
AutoFact: transcription factor bHLH76 [Arabidopsis thaliana] gb|AAS79545.1| putative transcription factor [Arabidopsis thaliana] emb|CAG25856.1| hypothetical protein [Arabidopsis thaliana] gb|AEE30669.1| transcription factor bHLH76 [Arabidopsis thaliana] 4.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: BHLH transcription factor GBOF-1 3.027e-10
C-terminus
sp_v3.0_unigene13823 SustainPine v3.0 1017
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q0WVV0.1|PPR31_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g10910, chloroplastic; Flags: Precursor dbj|BAE98748.1| membrane-associated salt-inducible protein isol 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene13826 SustainPine v3.0 939
AutoFact: LYR family of Fe/S cluster biogenesis protein [Arabidopsis thaliana] gb|AAU15177.1| At1g76060 [Arabidopsis thaliana] gb|AEE35791.1| LYR family of Fe/S cluster biogenesis protein [Arabidopsis thaliana] 6.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene14065 SustainPine v3.0 888
AutoFact: Protein SUPPRESSOR OF GENE SILENCING 3 n=1 Tax=Solanum lycopersicum RepID=SGS3_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein SUPPRESSOR OF GENE SILENCING 3 2.694e-09
Putative C-terminus
sp_v3.0_unigene14079 SustainPine v3.0 2087
AutoFact: pfam00534, Glycos_transf_1, Glycosyl transferases group 1 9.0e-30
FL-Next: Isoform 2 of GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Arabidopsis thaliana GN=ALG11 0.0
Sma3: Glycosyltransferase family 4 protein 2.408e-07
Complete

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain