Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: tRNA(Ile)-lysidine/2-thiocytidine synthase

Term: IPR011063  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene2741 SustainPine v3.0 1861
AutoFact: cytoplasmic tRNA 2-thiolation protein 1 [Arabidopsis thaliana] sp|O64862.2|CTU1_ARATH RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName: Full=Cytoplasmic tRNA adenylyltransferase 1 dbj|BAC41934.1| unknown protein [Arabidopsis thaliana] gb|AAP 0.0
FL-Next: sp=Cytoplasmic tRNA 2-thiolation protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Chromosome chr18 scaffold_1, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene5902 SustainPine v3.0 1857
AutoFact: tRNA(Ile)-lysidine synthetase [Synechococcus sp. JA-3-3Ab] sp|Q2JRN8.1|TILS_SYNJA RecName: Full=tRNA(Ile)-lysidine synthase; AltName: Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName: Full=tRNA(Ile)-lysidine synthetase gb|ABD00708.1| tRNA(Ile)-lysidine s 1.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: tRNA(Ile)-lysidine synthase, chloroplastic 8.22e-15
Complete
sp_v3.0_unigene12288 SustainPine v3.0 2029
AutoFact: tRNA(Ile)-lysidine synthetase [Nostoc punctiforme PCC 73102] gb|ACC84249.1| tRNA(Ile)-lysidine synthetase [Nostoc punctiforme PCC 73102] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
C-terminus
sp_v3.0_unigene23229 SustainPine v3.0 986
AutoFact: tRNA(Ile)-lysidine synthase, chloroplastic n=1 Tax=Zygnema circumcarinatum RepID=TILS_ZYGCR 5.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene27795 SustainPine v3.0 1454
AutoFact: Swi3 multi-domain protein 2.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene29532 SustainPine v3.0 1097
AutoFact: tRNA(Ile)-lysidine synthase, chloroplastic n=1 Tax=Zygnema circumcarinatum RepID=TILS_ZYGCR 1.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene36364 SustainPine v3.0 814
AutoFact: tRNA(Ile)-lysidine synthase, chloroplastic n=1 Tax=Zygnema circumcarinatum RepID=TILS_ZYGCR 9.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene51665 SustainPine v3.0 128
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene65365 SustainPine v3.0 180
AutoFact: tRNA(Ile)-lysidine synthetase [Nostoc punctiforme PCC 73102] gb|ACC84249.1| tRNA(Ile)-lysidine synthetase [Nostoc punctiforme PCC 73102] 1.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene73648 SustainPine v3.0 435
AutoFact: Malate dehydrogenase n=1 Tax=Pinus pinaster RepID=F4MKL8_PINPS 3.0e-25
FL-Next: sp=Malate dehydrogenase; Pinus pinaster (Maritime pine). 0.0
Sma3: Malate dehydrogenase 0.0
Internal
sp_v3.0_unigene96580 SustainPine v3.0 345
AutoFact: cytoplasmic tRNA 2-thiolation protein 1 [Arabidopsis thaliana] sp|O64862.2|CTU1_ARATH RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName: Full=Cytoplasmic tRNA adenylyltransferase 1 dbj|BAC41934.1| unknown protein [Arabidopsis thaliana] gb|AAP 9.0e-32
FL-Next: sp=Cytoplasmic tRNA 2-thiolation protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Cytoplasmic tRNA adenylyltransferase 1 1.807e-13
C-terminus
sp_v3.0_unigene100393 SustainPine v3.0 797
AutoFact: PP-loop [Anabaena variabilis ATCC 29413] gb|ABA20135.1| PP-loop [Anabaena variabilis ATCC 29413] 6.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: tRNA(Ile)-lysidine synthase, chloroplastic 5.586e-15
N-terminus
sp_v3.0_unigene101808 SustainPine v3.0 647
AutoFact: protein raspberry 3 [Arabidopsis thaliana] gb|AAK64168.1| unknown protein [Arabidopsis thaliana] gb|AEE76923.1| protein raspberry 3 [Arabidopsis thaliana] 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Raspberry3, putative 8.772e-06
C-terminus
sp_v3.0_unigene131168 SustainPine v3.0 381
AutoFact: [D] COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 7.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene141181 SustainPine v3.0 681
AutoFact: CCHC-type zinc finger protein-like n=3 Tax=Oryza sativa RepID=Q6Z6G7_ORYSJ 6.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain