Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Glycine cleavage T-protein, C-terminal barrel

Term: IPR013977  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene591 SustainPine v3.0 1531
AutoFact: aminomethyltransferase [Arabidopsis thaliana] ref|NP_001077748.1| aminomethyltransferase [Arabidopsis thaliana] ref|NP_001117522.1| aminomethyltransferase [Arabidopsis thaliana] dbj|BAD43247.1| unnamed protein product [Arabidopsis thaliana] gb|AEE33760.1| 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene2220 SustainPine v3.0 2056
AutoFact: Aminomethyltransferase n=1 Tax=Picea sitchensis RepID=D5A852_PICSI 0.0
FL-Next: sp=Aminomethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr10 scaffold_297, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene9493 SustainPine v3.0 1806
AutoFact: [R] COG0354 Predicted aminomethyltransferase related to GcvT 2.0e-22
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene54363 SustainPine v3.0 409
AutoFact: Aminomethyltransferase n=4 Tax=Arabidopsis RepID=Q681Y3_ARATH 9.0e-29
FL-Next: tr=At1g60990; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Internal
sp_v3.0_unigene56663 SustainPine v3.0 407
AutoFact: Aminomethyltransferase n=1 Tax=Volvox carteri f. nagariensis RepID=D8UF24_VOLCA 6.0e-28
FL-Next: sp=Aminomethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glycine cleavage system T protein 2.651e-19
C-terminus
sp_v3.0_unigene63506 SustainPine v3.0 306
AutoFact: aminomethyltransferase [Arabidopsis thaliana] ref|NP_001077748.1| aminomethyltransferase [Arabidopsis thaliana] ref|NP_001117522.1| aminomethyltransferase [Arabidopsis thaliana] dbj|BAD43247.1| unnamed protein product [Arabidopsis thaliana] gb|AEE33760.1| 4.0e-20
FL-Next: tr=Aminomethyltransferase; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Internal
sp_v3.0_unigene83534 SustainPine v3.0 224
AutoFact: Aminomethyltransferase n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4RF18_PHEZH 5.0e-06
coding
sp_v3.0_unigene95874 SustainPine v3.0 260
AutoFact: Aminomethyltransferase n=4 Tax=Arabidopsis RepID=Q681Y3_ARATH 3.0e-29
FL-Next: tr=At1g60990; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene99777 SustainPine v3.0 423
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
C-terminus
sp_v3.0_unigene141280 SustainPine v3.0 179
AutoFact: Aminomethyltransferase n=1 Tax=Picea sitchensis RepID=D5A852_PICSI 2.0e-08
FL-Next: sp=Aminomethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glycine cleavage system T protein 6.269e-16
Internal
sp_v3.0_unigene148216 SustainPine v3.0 371
AutoFact: Aminomethyltransferase, mitochondrial n=2 Tax=Arabidopsis RepID=GCST_ARATH 4.0e-09
FL-Next: sp=Aminomethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glycine cleavage system T protein 5.505e-20
Internal
sp_v3.0_unigene151069 SustainPine v3.0 442
AutoFact: Aminomethyltransferase n=1 Tax=Leptosphaeria maculans RepID=E4ZMN2_LEPMC 5.0e-32
FL-Next: sp=Aminomethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glycine cleavage system T protein 1.893e-19
C-terminus
sp_v3.0_unigene151202 SustainPine v3.0 391
AutoFact: Glycine cleavage T-protein (Aminomethyl transferase) n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RXQ9_9GAMM 9.0e-23
FL-Next: tr=Putative sarcosine dehydrogenase, SDH3; Aureococcus anophagefferens (Harmful bloom alga). 0.0
Sma3: Sarcosine dehydrogenase 3.899e-06
C-terminus
sp_v3.0_unigene157078 SustainPine v3.0 261
AutoFact: Aminomethyltransferase n=1 Tax=Ectocarpus siliculosus RepID=D7G1U3_ECTSI 2.0e-26
FL-Next: sp=Aminomethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glycine decarboxylase t-protein 3.292e-10
Internal
sp_v3.0_unigene166093 SustainPine v3.0 304
AutoFact: Sarcosine dehydrogenase n=1 Tax=Thalassiosira pseudonana RepID=B8C3L3_THAPS 1.0e-16
FL-Next: tr=Sarcosine dehydrogenase; Thalassiosira pseudonana (Marine diatom) (Cyclotella nana). 0.0
Sma3: Sarcosine dehydrogenase 6.823e-06
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain