Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, GRF-type

Term: IPR010666  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene693 SustainPine v3.0 519
AutoFact: GRF zinc finger family protein n=1 Tax=Oryza sativa Japonica Group RepID=Q2QXT9_ORYSJ 2.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin-like protein 5 1.427e-08
Complete
sp_v3.0_unigene1600 SustainPine v3.0 1539
AutoFact: CCHC-type zinc knuckle protein [Arabidopsis thaliana] emb|CAB86673.1| putative protein [Arabidopsis thaliana] gb|AAL38752.1| unknown protein [Arabidopsis thaliana] gb|AAM91719.1| unknown protein [Arabidopsis thaliana] gb|AEE77756.1| CCHC-type zinc knuckle 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene21031 SustainPine v3.0 2525
AutoFact: Histone mRNA exonuclease 1 n=3 Tax=Andropogoneae RepID=B6THB1_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene21919 SustainPine v3.0 298
AutoFact: endonuclease 2 [Arabidopsis thaliana] gb|AEE86607.1| endonuclease 2 [Arabidopsis thaliana] 1.0e-06
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
N-terminus
sp_v3.0_unigene34483 SustainPine v3.0 538
AutoFact: GRF zinc finger family protein n=1 Tax=Oryza sativa Japonica Group RepID=Q2QXT9_ORYSJ 2.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin-like protein 5 1.427e-08
Complete
sp_v3.0_unigene34583 SustainPine v3.0 669
AutoFact: GRF zinc finger family protein n=1 Tax=Oryza sativa Japonica Group RepID=Q2QXT9_ORYSJ 3.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin-like protein 5 1.427e-08
Complete
sp_v3.0_unigene36347 SustainPine v3.0 1297
AutoFact: GRF zinc finger family protein n=1 Tax=Oryza sativa Japonica Group RepID=Q2QXT9_ORYSJ 1.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin-like protein 5 1.427e-08
Complete
sp_v3.0_unigene54347 SustainPine v3.0 486
AutoFact: DNA topoisomerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U3N3_PHYPA 0.0
FL-Next: sp=DNA topoisomerase; Physcomitrella patens subsp. patens (Moss). 0.0
Sma3: Putative DNA topoisomerase III beta 9.517e-08
Internal
sp_v3.0_unigene55745 SustainPine v3.0 324
AutoFact: endonuclease 2 [Arabidopsis thaliana] gb|AAL32628.1| putative protein [Arabidopsis thaliana] gb|AAM13328.1| putative protein [Arabidopsis thaliana] gb|AEE86606.1| endonuclease 2 [Arabidopsis thaliana] 3.0e-17
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene58734 SustainPine v3.0 216
AutoFact: AP endonuclease 2-like n=3 Tax=Oryza sativa RepID=Q69JZ1_ORYSJ 1.0e-08
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene62162 SustainPine v3.0 257
AutoFact: DNA topoisomerase III [Arabidopsis thaliana] dbj|BAA96895.1| DNA topoisomerase III [Arabidopsis thaliana] gb|ACA50279.1| topoisomerase 3 alpha [Arabidopsis thaliana] gb|AED97816.1| DNA topoisomerase III [Arabidopsis thaliana] 8.0e-15
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene64887 SustainPine v3.0 206
AutoFact: DNA topoisomerase (Fragment) n=1 Tax=Ricinus communis RepID=B9SN22_RICCO 2.0e-18
FL-Next: sp=DNA topoisomerase; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Internal
sp_v3.0_unigene71660 SustainPine v3.0 307
AutoFact: DNA topoisomerase n=1 Tax=Sorghum bicolor RepID=C5WWW3_SORBI 3.0e-37
FL-Next: sp=DNA topoisomerase; Brachypodium distachyon (Purple false brome) (Trachynia distachya). 0.0
Internal
sp_v3.0_unigene94367 SustainPine v3.0 644
AutoFact: endonuclease 2 [Arabidopsis thaliana] gb|AEE86607.1| endonuclease 2 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene113257 SustainPine v3.0 322
AutoFact: Ap endonuclease, putative n=1 Tax=Ricinus communis RepID=B9S6N7_RICCO 3.0e-26
FL-Next: tr=Ap endonuclease, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene129382 SustainPine v3.0 291
AutoFact: DNA topoisomerase n=1 Tax=Populus trichocarpa RepID=B9H4K8_POPTR 6.0e-07
FL-Next: sp=DNA topoisomerase; subsp. trichocarpa). 0.0
C-terminus
sp_v3.0_unigene195299 SustainPine v3.0 211
AutoFact: endonuclease 2 [Arabidopsis thaliana] gb|AAL32628.1| putative protein [Arabidopsis thaliana] gb|AAM13328.1| putative protein [Arabidopsis thaliana] gb|AEE86606.1| endonuclease 2 [Arabidopsis thaliana] 3.0e-23
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain