Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: DNA-directed DNA polymerase, family B, conserved site

Term: IPR017964  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene133 SustainPine v3.0 1235
AutoFact: putative protein phosphatase 2C 20 [Arabidopsis thaliana] gb|AAL06477.1|AF411787_1 At2g20630/F23N11.5 [Arabidopsis thaliana] dbj|BAB84701.1| protein phosphatase 2C [Arabidopsis thaliana] gb|AAM10409.1| At2g20630/F23N11.5 [Arabidopsis thaliana] gb|AAD21710 0.0
FL-Next: Isoform 2 of Probable protein phosphatase 2C 20 OS=Arabidopsis thaliana GN=PPC3-1.2 0.0
Sma3: Protein phosphatase 2c, putative 8.306e-21
Complete
sp_v3.0_unigene147 SustainPine v3.0 2292
AutoFact: DNA polymerase n=2 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MMP0_ARALL 0.0
FL-Next: sp=DNA polymerase alpha catalytic subunit; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: DNA polymerase 3.052e-14
C-terminus
sp_v3.0_unigene452 SustainPine v3.0 1578
AutoFact: Zn-finger in Ran binding domain-containing protein [Arabidopsis thaliana] gb|AAG51125.1|AC069144_22 hypothetical protein [Arabidopsis thaliana] gb|AEE33177.1| Zn-finger in Ran binding domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene1544 SustainPine v3.0 3990
AutoFact: DNA polymerase (Fragment) n=2 Tax=Spermatophyta RepID=D7U4B5_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene2198 SustainPine v3.0 660
AutoFact: Putative Myb DNA binding protein n=1 Tax=Eutrema halophilum RepID=C7SI19_THEHA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative regulatory protein 1.488e-08
Internal
sp_v3.0_unigene2484 SustainPine v3.0 1298
AutoFact: DNA polymerase n=1 Tax=Populus trichocarpa RepID=B9HHA9_POPTR 0.0
FL-Next: sp=DNA polymerase alpha catalytic subunit; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: DNA polymerase 5.732e-20
Internal
sp_v3.0_unigene7798 SustainPine v3.0 896
AutoFact: Zn-finger in Ran binding domain-containing protein [Arabidopsis thaliana] gb|AAG51125.1|AC069144_22 hypothetical protein [Arabidopsis thaliana] gb|AEE33177.1| Zn-finger in Ran binding domain-containing protein [Arabidopsis thaliana] 9.94922e-44
FL-Next: sp=Zinc finger protein VAR3, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene8475 SustainPine v3.0 1791
AutoFact: putative protein phosphatase 2C 9 [Arabidopsis thaliana] sp|Q9LME4.1|P2C09_ARATH RecName: Full=Probable protein phosphatase 2C 9; Short=AtPP2C09; AltName: Full=Phytochrome-associated protein phosphatase 2C; Short=PAPP2C gb|AAF87263.1|AC068562_10 Strong si 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein phosphatase 2c, putative 9.579e-17
Putative Complete
sp_v3.0_unigene8974 SustainPine v3.0 2017
AutoFact: ATP-dependent clp protease ATP-binding subunit clpx, putative n=1 Tax=Ricinus communis RepID=B9S1U1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: ATP-dependent clp protease ATP-binding subunit clpx, putative 5.606e-15
C-terminus
sp_v3.0_unigene9035 SustainPine v3.0 695
AutoFact: Protein phosphatase 2C-like [Medicago truncatula] 2.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein phosphatase 2c, putative 5.451e-16
Putative Complete
sp_v3.0_unigene9181 SustainPine v3.0 1667
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9S7B3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative regulatory protein 1.052e-08
Complete
sp_v3.0_unigene9791 SustainPine v3.0 1034
AutoFact: putative ethylene-responsive RNA helicase [Oryza sativa Japonica Group] 5.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DEAD-box ATP-dependent RNA helicase 30 3.81e-08
Putative C-terminus
sp_v3.0_unigene10117 SustainPine v3.0 1107
AutoFact: DNA polymerase n=1 Tax=Ricinus communis RepID=B9RF68_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene10353 SustainPine v3.0 1766
AutoFact: putative protein phosphatase 2C 76 [Arabidopsis thaliana] sp|Q94AT1.1|P2C76_ARATH RecName: Full=Probable protein phosphatase 2C 76; Short=AtPP2C76 gb|AAK76493.1| putative protein phosphatase 2C [Arabidopsis thaliana] gb|AAM14299.1| putative phosphatase 2C 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein phosphatase 2c, putative 3.52e-20
Complete
sp_v3.0_unigene10556 SustainPine v3.0 470
AutoFact: Nucleotid_trans domain containing protein 4.2039e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative regulatory protein 2.543e-13
Putative C-terminus
sp_v3.0_unigene12071 SustainPine v3.0 1142
AutoFact: ATP-dependent clp protease ATP-binding subunit clpx, putative n=1 Tax=Ricinus communis RepID=B9S1U1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP-dependent clp protease ATP-binding subunit clpx, putative 5.606e-15
Internal
sp_v3.0_unigene13299 SustainPine v3.0 941
AutoFact: Nucleotid_trans domain containing protein 6.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome undetermined scaffold_109, whole genome shotgun sequence 5.326e-07
C-terminus
sp_v3.0_unigene13370 SustainPine v3.0 2813
AutoFact: ATP-dependent clp protease ATP-binding subunit clpx, putative n=1 Tax=Ricinus communis RepID=B9S1U1_RICCO 0.0
FL-Next: tr=ATP-dependent clp protease ATP-binding subunit clpx, putative; Ricinus communis (Castor bean). 0.0
Sma3: ATP-dependent clp protease ATP-binding subunit clpx, putative 5.606e-15
Complete
sp_v3.0_unigene13392 SustainPine v3.0 1360
AutoFact: Protein phosphatase 2C-like [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein phosphatase 2c, putative 6.94e-23
Putative Complete
sp_v3.0_unigene20833 SustainPine v3.0 1055
AutoFact: Putative Myb DNA binding protein n=1 Tax=Eutrema halophilum RepID=C7SI19_THEHA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative regulatory protein 7.196e-09
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain