Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: DNA-directed DNA polymerase, family B, conserved site

Term: IPR017964  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene76167 SustainPine v3.0 286
AutoFact: Nucleotid_trans domain containing protein 2.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative regulatory protein 9.505e-09
Internal
sp_v3.0_unigene76920 SustainPine v3.0 326
AutoFact: Nucleotid_trans domain containing protein 1.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Regulatory protein, putative, expressed 1.167e-08
Internal
sp_v3.0_unigene79916 SustainPine v3.0 159
AutoFact: Unassigned protein
FL-Next: sp=Zinc finger protein VAR3, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene98922 SustainPine v3.0 476
AutoFact: Protein phosphatase 2C-like [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein phosphatase 2c, putative 5.662e-25
C-terminus
sp_v3.0_unigene100271 SustainPine v3.0 767
AutoFact: DUF566 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Emb|CAB52444.1 4.17e-09
Complete
sp_v3.0_unigene100583 SustainPine v3.0 287
AutoFact: DUF566 domain containing protein 5.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Emb|CAB52444.1 5.451e-09
Putative N-terminus
sp_v3.0_unigene101231 SustainPine v3.0 325
AutoFact: ATP dependent Clp protease ATP-binding subunit ClpX1 [Pennisetum glaucum] 4.0e-32
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: ATP-dependent clp protease ATP-binding subunit clpx, putative 4.504e-15
Internal
sp_v3.0_unigene104877 SustainPine v3.0 361
AutoFact: DNA polymerase n=1 Tax=Ricinus communis RepID=B9RF68_RICCO 3.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene105329 SustainPine v3.0 243
AutoFact: Transducin/WD40 domain-containing protein n=3 Tax=Arabidopsis RepID=F4JN30_ARATH 1.0e-15
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene112113 SustainPine v3.0 483
AutoFact: Nucleotid_trans domain containing protein 1.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Regulatory protein, putative, expressed 1.439e-08
Internal
sp_v3.0_unigene115326 SustainPine v3.0 322
AutoFact: DNA polymerase (Fragment) n=1 Tax=Vitis vinifera RepID=D7U238_VITVI 3.0e-24
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: DNA polymerase 1.204e-09
Internal
sp_v3.0_unigene120075 SustainPine v3.0 528
AutoFact: Nucleotid_trans domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Regulatory protein 1.411e-15
Internal
sp_v3.0_unigene121568 SustainPine v3.0 263
AutoFact: Zn-finger in Ran binding domain-containing protein [Arabidopsis thaliana] gb|AAG51125.1|AC069144_22 hypothetical protein [Arabidopsis thaliana] gb|AEE33177.1| Zn-finger in Ran binding domain-containing protein [Arabidopsis thaliana] 2.0e-25
FL-Next: sp=Zinc finger protein VAR3, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene121670 SustainPine v3.0 351
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
N-terminus
sp_v3.0_unigene122635 SustainPine v3.0 432
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene125790 SustainPine v3.0 258
AutoFact: DNA polymerase n=3 Tax=Selaginella moellendorffii RepID=D8RZN4_SELML 3.0e-25
FL-Next: sp=DNA polymerase delta catalytic subunit; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA polymerase 2.851e-12
Internal
sp_v3.0_unigene127629 SustainPine v3.0 957
AutoFact: Probable protein phosphatase 2C 52 n=2 Tax=Oryza sativa RepID=P2C52_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein phosphatase 2C 5.519e-35
C-terminus
sp_v3.0_unigene127967 SustainPine v3.0 1139
AutoFact: Nucleotid_trans domain containing protein 7.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative regulatory protein 8.699e-09
Putative Complete
sp_v3.0_unigene130710 SustainPine v3.0 211
AutoFact: DNA polymerase n=1 Tax=Ricinus communis RepID=B9SC90_RICCO 1.0e-23
FL-Next: sp=DNA polymerase alpha catalytic subunit; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: DNA polymerase alpha catalytic subunit 3.801e-09
Internal
sp_v3.0_unigene135652 SustainPine v3.0 342
AutoFact: Nucleotid_trans domain containing protein 4.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Regulatory protein, putative, expressed 1.193e-08
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain