Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: DNA-directed DNA polymerase, family B

Term: IPR006172  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene59919 SustainPine v3.0 338
AutoFact: DNA polymerase n=2 Tax=Andropogoneae RepID=C5XR76_SORBI 3.0e-24
FL-Next: sp=DNA polymerase alpha catalytic subunit; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: DNA polymerase 3.944e-17
Internal
sp_v3.0_unigene62114 SustainPine v3.0 134
AutoFact: DNA polymerase n=1 Tax=Arabidopsis thaliana RepID=Q9SGD5_ARATH 4.0e-16
FL-Next: sp=DNA polymerase; Glycine max (Soybean) (Glycine hispida). 0.0
Sma3: DNA polymerase 3.605e-32
Internal
sp_v3.0_unigene63053 SustainPine v3.0 327
AutoFact: DNA polymerase (Fragment) n=2 Tax=Triticum aestivum RepID=D8L9N3_WHEAT 7.0e-39
FL-Next: sp=DNA polymerase alpha catalytic subunit; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: DNA polymerase alpha catalytic subunit 3.801e-09
Internal
sp_v3.0_unigene64144 SustainPine v3.0 283
AutoFact: DNA polymerase n=1 Tax=Ricinus communis RepID=B9SSU6_RICCO 3.0e-28
FL-Next: sp=DNA polymerase; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Sma3: DNA polymerase 1.099e-23
Internal
sp_v3.0_unigene66976 SustainPine v3.0 245
AutoFact: DNA polymerase n=1 Tax=Populus trichocarpa RepID=B9MYH6_POPTR 9.0e-29
FL-Next: sp=DNA polymerase; subsp. trichocarpa). 0.0
Sma3: DNA polymerase 2.672e-35
Internal
sp_v3.0_unigene68941 SustainPine v3.0 211
AutoFact: DNA polymerase n=4 Tax=Arabidopsis RepID=Q9ZVC8_ARATH 6.0e-11
FL-Next: sp=DNA polymerase; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Sma3: DNA polymerase 1.579e-23
Internal
sp_v3.0_unigene72091 SustainPine v3.0 140
AutoFact: Unassigned protein
FL-Next: sp=Zinc finger protein VAR3, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene72806 SustainPine v3.0 224
AutoFact: DNA polymerase (Fragment) n=2 Tax=Spermatophyta RepID=D7U4B5_VITVI 4.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA polymerase 3.515e-23
C-terminus
sp_v3.0_unigene79916 SustainPine v3.0 159
AutoFact: Unassigned protein
FL-Next: sp=Zinc finger protein VAR3, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene104877 SustainPine v3.0 361
AutoFact: DNA polymerase n=1 Tax=Ricinus communis RepID=B9RF68_RICCO 3.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene106574 SustainPine v3.0 443
AutoFact: DNA polymerase n=2 Tax=Oryza sativa RepID=Q6K777_ORYSJ 0.0
FL-Next: sp=DNA polymerase; Brachypodium distachyon (Purple false brome) (Trachynia distachya). 0.0
Sma3: DNA polymerase 4.748e-35
Internal
sp_v3.0_unigene111126 SustainPine v3.0 327
AutoFact: DNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SXI7_PHYPA 8.00001e-42
FL-Next: sp=DNA polymerase; Physcomitrella patens subsp. patens (Moss). 0.0
Sma3: DNA polymerase 2.079e-26
Internal
sp_v3.0_unigene115326 SustainPine v3.0 322
AutoFact: DNA polymerase (Fragment) n=1 Tax=Vitis vinifera RepID=D7U238_VITVI 3.0e-24
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: DNA polymerase 1.204e-09
Internal
sp_v3.0_unigene121568 SustainPine v3.0 263
AutoFact: Zn-finger in Ran binding domain-containing protein [Arabidopsis thaliana] gb|AAG51125.1|AC069144_22 hypothetical protein [Arabidopsis thaliana] gb|AEE33177.1| Zn-finger in Ran binding domain-containing protein [Arabidopsis thaliana] 2.0e-25
FL-Next: sp=Zinc finger protein VAR3, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene122635 SustainPine v3.0 432
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene125790 SustainPine v3.0 258
AutoFact: DNA polymerase n=3 Tax=Selaginella moellendorffii RepID=D8RZN4_SELML 3.0e-25
FL-Next: sp=DNA polymerase delta catalytic subunit; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA polymerase 2.851e-12
Internal
sp_v3.0_unigene130710 SustainPine v3.0 211
AutoFact: DNA polymerase n=1 Tax=Ricinus communis RepID=B9SC90_RICCO 1.0e-23
FL-Next: sp=DNA polymerase alpha catalytic subunit; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: DNA polymerase alpha catalytic subunit 3.801e-09
Internal
sp_v3.0_unigene135583 SustainPine v3.0 478
AutoFact: DNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SXI7_PHYPA 2.0e-34
FL-Next: sp=DNA polymerase; Physcomitrella patens subsp. patens (Moss). 0.0
Sma3: DNA polymerase 7.927e-21
Internal
sp_v3.0_unigene137659 SustainPine v3.0 362
AutoFact: DNA polymerase n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7KI06_ARALL 3.0e-17
FL-Next: sp=DNA polymerase; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Sma3: DNA polymerase 8.238e-07
Internal
sp_v3.0_unigene161637 SustainPine v3.0 436
AutoFact: DNA polymerase n=1 Tax=Ricinus communis RepID=B9RF68_RICCO 7.0e-34
FL-Next: sp=Zinc finger protein VAR3, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain