Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: DNA topoisomerase, type IIA, conserved site

Term: IPR018522  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene359 SustainPine v3.0 819
AutoFact: ethylene-responsive transcription factor WRI1 [Arabidopsis thaliana] gb|AEE79213.1| ethylene-responsive transcription factor WRI1 [Arabidopsis thaliana] 0.0
FL-Next: tr=AINTEGUMENTA-like protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: AP2 domain-containing transcription factor 0.0
Internal
sp_v3.0_unigene563 SustainPine v3.0 2759
AutoFact: Serine/threonine-protein phosphatase (Fragment) n=5 Tax=Magnoliophyta RepID=D7T1Q5_VITVI 0.0
FL-Next: sp=Serine/threonine-protein phosphatase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine/threonine protein phosphatase 0.0
Complete
sp_v3.0_unigene1243 SustainPine v3.0 3732
AutoFact: DNA topoisomerase 2 (Fragment) n=1 Tax=Vitis vinifera RepID=D7T341_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene1585 SustainPine v3.0 2855
AutoFact: AP2 protein n=1 Tax=Elaeis guineensis RepID=A9JQY7_ELAGV 0.0
FL-Next: sp=AP2-like ethylene-responsive transcription factor AIL5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: AP2 domain-containing transcription factor 0.0
Complete
sp_v3.0_unigene2326 SustainPine v3.0 1690
AutoFact: putative AP2 domain transcription factor [Arabidopsis thaliana] 0.0
FL-Next: Isoform 2 of AP2-like ethylene-responsive transcription factor At2g41710 OS=Arabidopsis thaliana GN=At2g41710 0.0
Sma3: AP2 domain-containing transcription factor 0.0
Complete
sp_v3.0_unigene2354 SustainPine v3.0 4198
AutoFact: Serine/threonine-protein phosphatase (Fragment) n=2 Tax=Vitis vinifera RepID=D7TP64_VITVI 0.0
FL-Next: sp=Serine/threonine-protein phosphatase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine/threonine protein phosphatase 0.0
Complete
sp_v3.0_unigene2767 SustainPine v3.0 1410
AutoFact: Pollen major allergen No.121 isoform 1 n=1 Tax=Cryptomeria japonica RepID=Q588C0_CRYJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 2.866e-33
Complete
sp_v3.0_unigene3184 SustainPine v3.0 878
AutoFact: Xyloglucan endotransglycosylase n=1 Tax=Shorea parvifolia subsp. parvifolia RepID=C7F8A5_9ROSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 4.08058e-42
C-terminus
sp_v3.0_unigene3387 SustainPine v3.0 1285
AutoFact: Xyloglucan endotransglucosylase/hydrolase protein 9, putative n=1 Tax=Ricinus communis RepID=B9S9N2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 3.483e-39
Complete
sp_v3.0_unigene3647 SustainPine v3.0 1332
AutoFact: Pollen major allergen No.121 isoform 1 n=1 Tax=Cryptomeria japonica RepID=Q588C0_CRYJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 2.604e-33
Complete
sp_v3.0_unigene4205 SustainPine v3.0 1367
AutoFact: Xyloglucan endotransglucosylase/hydrolase protein 9, putative n=1 Tax=Ricinus communis RepID=B9S9N2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 3.387e-39
Complete
sp_v3.0_unigene4264 SustainPine v3.0 499
AutoFact: Pollen major allergen No.121 isoform 1 n=1 Tax=Cryptomeria japonica RepID=Q588C0_CRYJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 6.576e-39
Internal
sp_v3.0_unigene4581 SustainPine v3.0 464
AutoFact: Xyloglucan endotransglycosylase n=1 Tax=Annona cherimola RepID=B8XXI4_ANNCH 6.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 9.775e-22
N-terminus
sp_v3.0_unigene4993 SustainPine v3.0 941
AutoFact: Xyloglucan endotransglucosylase/hydrolase protein 14, putative n=1 Tax=Ricinus communis RepID=B9RKL5_RICCO 0.0
FL-Next: tr=Pollen major allergen No.121 isoform 1; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
Sma3: Xyloglucan endotransglucosylase/hydrolase 1.334e-34
C-terminus
sp_v3.0_unigene4997 SustainPine v3.0 297
AutoFact: Pollen major allergen No.121 isoform 1 n=1 Tax=Cryptomeria japonica RepID=Q588C0_CRYJA 5.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 1.803e-23
Internal
sp_v3.0_unigene5483 SustainPine v3.0 1558
AutoFact: AINTEGUMENTA-like protein n=1 Tax=Pinus thunbergii RepID=Q76H96_PINTH 0.0
FL-Next: tr=AINTEGUMENTA-like protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: AP2 domain-containing transcription factor 0.0
C-terminus
sp_v3.0_unigene5766 SustainPine v3.0 2502
AutoFact: DNA topoisomerase 2 n=1 Tax=Micromonas sp. RCC299 RepID=C1E5N4_MICSR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA topoisomerase 2 0.0
Putative C-terminus
sp_v3.0_unigene6167 SustainPine v3.0 1637
AutoFact: Xyloglucan endotransglucosylase/hydrolase 2 n=1 Tax=Rosa x borboniana RepID=Q2MK81_9ROSA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 1.19797e-41
Complete
sp_v3.0_unigene6785 SustainPine v3.0 1704
AutoFact: Regulatory protein NPR1, putative n=1 Tax=Ricinus communis RepID=B9RK83_RICCO 0.0
FL-Next: sp=Regulatory protein NPR2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: NPR1-like protein 4.234e-36
Putative N-terminus
sp_v3.0_unigene6818 SustainPine v3.0 1252
AutoFact: AINTEGUMENTA-like protein n=1 Tax=Ginkgo biloba RepID=Q2Z2G4_GINBI 0.0
FL-Next: tr=AINTEGUMENTA-like protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: AP2 domain-containing transcription factor 4.591e-27
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain