Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: DNA topoisomerase, type IIA, conserved site

Term: IPR018522  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene144601 SustainPine v3.0 979
AutoFact: Xyloglucan endotransglucosylase/hydrolase protein 9, putative n=1 Tax=Ricinus communis RepID=B9S9N2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein xyloglucan endotransglucosylase; Pinus pinaster (Maritime pine). 0.0
Sma3: Xyloglucan endotransglycosylase 2.495e-36
Putative Complete
sp_v3.0_unigene144749 SustainPine v3.0 423
AutoFact: Xyloglucan endotransglucosylase/hydrolase protein 9, putative n=1 Tax=Ricinus communis RepID=B9S9N2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglucosylase/hydrolase 4.962e-39
Internal
sp_v3.0_unigene144857 SustainPine v3.0 608
AutoFact: Serine/threonine-protein phosphatase n=1 Tax=Picea sitchensis RepID=C0PPR8_PICSI 0.0
FL-Next: sp=Serine/threonine-protein phosphatase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine/threonine protein phosphatase 0.0
N-terminus
sp_v3.0_unigene145321 SustainPine v3.0 367
AutoFact: xyloglucan endotransglycosylase precursor [Populus tremula x Populus tremuloides] 6.0e-28
FL-Next: tr=Putative uncharacterized protein xyloglucan endotransglucosylase; Pinus pinaster (Maritime pine). 0.0
Sma3: Xyloglucan endotransglycosylase 2.683e-38
N-terminus
sp_v3.0_unigene145516 SustainPine v3.0 656
AutoFact: Xyloglucan endotransglycosylase n=1 Tax=Tropaeolum majus RepID=Q41614_TROMA 0.0
FL-Next: tr=Putative uncharacterized protein xyloglucan endotransglucosylase; Pinus pinaster (Maritime pine). 0.0
Sma3: Xyloglucan endotransglycosylase 3.532e-39
Internal
sp_v3.0_unigene145781 SustainPine v3.0 1209
AutoFact: xyloglucan endotransglucosylase [Beta vulgaris subsp. vulgaris] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 5.389e-32
C-terminus
sp_v3.0_unigene145925 SustainPine v3.0 698
AutoFact: Pollen major allergen No.121 isoform 1 n=1 Tax=Cryptomeria japonica RepID=Q588C0_CRYJA 7.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 1.695e-34
Misassembled
sp_v3.0_unigene145973 SustainPine v3.0 1232
AutoFact: Pollen major allergen No.121 isoform 1 n=1 Tax=Cryptomeria japonica RepID=Q588C0_CRYJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 2.667e-33
Complete
sp_v3.0_unigene146266 SustainPine v3.0 895
AutoFact: [G] COG2273 Beta-glucanase/Beta-glucan synthetase 6.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglucosylase/hydrolase 5.046e-39
C-terminus
sp_v3.0_unigene146354 SustainPine v3.0 1038
AutoFact: Pollen major allergen No.121 isoform 1 n=1 Tax=Cryptomeria japonica RepID=Q588C0_CRYJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 5.60519e-45
Putative Complete
sp_v3.0_unigene146398 SustainPine v3.0 949
AutoFact: Pollen major allergen No.121 isoform 1 n=1 Tax=Cryptomeria japonica RepID=Q588C0_CRYJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 6.067e-39
N-terminus
sp_v3.0_unigene146405 SustainPine v3.0 404
AutoFact: Xyloglucan endotransglucosylase/hydrolase protein 22 precursor, putative (EC:2.4.1.207); K08235 xyloglucan:xyloglucosyl transferase [EC:2.4.1.207] 2.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglucosylase/hydrolase 3.102e-19
Putative C-terminus
sp_v3.0_unigene146438 SustainPine v3.0 665
AutoFact: Pollen major allergen No.121 isoform 1 n=1 Tax=Cryptomeria japonica RepID=Q588C0_CRYJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 6.474e-36
Putative C-terminus
sp_v3.0_unigene146461 SustainPine v3.0 1378
AutoFact: Pollen major allergen No.121 isoform 1 n=1 Tax=Cryptomeria japonica RepID=Q588C0_CRYJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 3.393e-36
Complete
sp_v3.0_unigene146480 SustainPine v3.0 628
AutoFact: Pollen major allergen No.121 isoform 1 n=1 Tax=Cryptomeria japonica RepID=Q588C0_CRYJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 1.771e-39
Putative N-terminus
sp_v3.0_unigene146501 SustainPine v3.0 1138
AutoFact: Pollen major allergen No.121 isoform 1 n=1 Tax=Cryptomeria japonica RepID=Q588C0_CRYJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 6.489e-39
Complete
sp_v3.0_unigene146517 SustainPine v3.0 636
AutoFact: pfam06955, XET_C, Xyloglucan endo-transglycosylase (XET) C-terminus 2.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 4.551e-32
C-terminus
sp_v3.0_unigene146549 SustainPine v3.0 448
AutoFact: Putative xyloglucan endotransglycosylase type 1 (Fragment) n=1 Tax=Pinus pinaster RepID=Q8VX84_PINPS 9.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 1.4013e-45
Internal
sp_v3.0_unigene148174 SustainPine v3.0 172
AutoFact: AP2-like ethylene-responsive transcription factor [Arabidopsis thaliana] sp|Q94AN4.1|AP2L1_ARATH RecName: Full=AP2-like ethylene-responsive transcription factor At1g16060 gb|AAK76589.1| unknown protein [Arabidopsis thaliana] gb|AAM91814.1| unknown protein 7.0e-07
FL-Next: tr=AINTEGUMENTA-like protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: AP2 domain-containing transcription factor 0.0
Internal
sp_v3.0_unigene149164 SustainPine v3.0 111
AutoFact: DNA topoisomerase 2 (Fragment) n=1 Tax=Vitis vinifera RepID=D7T341_VITVI 3.0e-08
FL-Next: sp=DNA topoisomerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain