Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: DNA topoisomerase, type IIA, conserved site

Term: IPR018522  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene129366 SustainPine v3.0 424
AutoFact: pfam06955, XET_C, Xyloglucan endo-transglycosylase (XET) C-terminus 1.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 4.277e-19
C-terminus
sp_v3.0_unigene132656 SustainPine v3.0 483
AutoFact: Xyloglucan endotransglycosylase n=1 Tax=Tropaeolum majus RepID=Q41614_TROMA 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglucosylase/hydrolase protein 22, putative 7.969e-08
N-terminus
sp_v3.0_unigene132847 SustainPine v3.0 466
AutoFact: Xyloglucan endotransglucosylase/hydrolase n=1 Tax=Dianthus caryophyllus RepID=D7URZ1_DIACA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 4.2039e-45
C-terminus
sp_v3.0_unigene133074 SustainPine v3.0 341
AutoFact: regulator of telomere elongation helicase 1 [Arabidopsis thaliana] gb|AEE36333.1| regulator of telomere elongation helicase 1 [Arabidopsis thaliana] 2.0e-24
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene133425 SustainPine v3.0 576
AutoFact: Putative xyloglucan endotransglucosylase/hydrolase n=1 Tax=Selaginella kraussiana RepID=Q1XD17_9TRAC 1.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglucosylase/hydrolase 5 2.486e-08
C-terminus
sp_v3.0_unigene134029 SustainPine v3.0 431
AutoFact: Rho GDP-dissociation inhibitor, putative n=1 Tax=Ricinus communis RepID=B9RXZ4_RICCO 1.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Rho GDP-dissociation inhibitor, putative 2.075e-17
Putative C-terminus
sp_v3.0_unigene134758 SustainPine v3.0 220
AutoFact: AP2 protein n=1 Tax=Elaeis guineensis RepID=A9JQY7_ELAGV 1.0e-32
FL-Next: tr=AINTEGUMENTA-like protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: AP2 domain-containing transcription factor 0.0
Internal
sp_v3.0_unigene136718 SustainPine v3.0 444
AutoFact: Xyloglucan endotransglucosylase/hydrolase 3 n=1 Tax=Actinidia eriantha RepID=C0IRG2_ACTER 5.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 6.627e-15
N-terminus
sp_v3.0_unigene137493 SustainPine v3.0 678
AutoFact: Xyloglucan endotransglucosylase/hydrolase n=1 Tax=Dianthus caryophyllus RepID=D7URZ1_DIACA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 5.60519e-45
C-terminus
sp_v3.0_unigene137748 SustainPine v3.0 374
AutoFact: Xyloglucan endotransglucosylase/hydrolase protein 9, putative n=1 Tax=Ricinus communis RepID=B9S9N2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 2.41864e-42
Internal
sp_v3.0_unigene138108 SustainPine v3.0 210
AutoFact: DNA topoisomerase 2 n=2 Tax=Malus x domestica RepID=Q2L363_MALDO 1.0e-10
FL-Next: sp=DNA topoisomerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA topoisomerase 2 2.973e-35
Internal
sp_v3.0_unigene140524 SustainPine v3.0 882
AutoFact: Xyloglucan:xyloglucosyl transferase (Fragment) n=4 Tax=Pseudotsuga RepID=C6FD23_PSEMZ 2.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 1.707e-39
C-terminus
sp_v3.0_unigene140843 SustainPine v3.0 479
AutoFact: ATP-binding cassette transporter, subfamily F, member 4, SmABCF4 n=2 Tax=Selaginella moellendorffii RepID=D8SD10_SELML 1.99965e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP-dependent transporter, putative 2.553e-10
Internal
sp_v3.0_unigene140927 SustainPine v3.0 327
AutoFact: Protein AINTEGUMENTA, putative n=1 Tax=Ricinus communis RepID=B9RM33_RICCO 4.0e-35
FL-Next: tr=AINTEGUMENTA-like protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: AP2 domain-containing transcription factor 0.0
Internal
sp_v3.0_unigene141669 SustainPine v3.0 481
AutoFact: Pollen major allergen No.121 isoform 1 n=1 Tax=Cryptomeria japonica RepID=Q588C0_CRYJA 3.00018e-42
FL-Next: tr=Pollen major allergen No.121 isoform 1; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
Sma3: Xyloglucan endotransglycosylase 3.038e-36
Internal
sp_v3.0_unigene142581 SustainPine v3.0 462
AutoFact: DNA topoisomerase II, putative n=1 Tax=Ricinus communis RepID=B9RVN3_RICCO 2.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene143031 SustainPine v3.0 494
AutoFact: Xyloglucan:xyloglucosyl transferase (Fragment) n=4 Tax=Pseudotsuga RepID=C6FD23_PSEMZ 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 2.999e-36
Putative C-terminus
sp_v3.0_unigene143550 SustainPine v3.0 274
AutoFact: ovule development aintegumenta-like protein BNM3 [Oryza sativa] 7.0e-32
FL-Next: tr=AINTEGUMENTA-like protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: AP2 domain-containing transcription factor 0.0
Internal
sp_v3.0_unigene143867 SustainPine v3.0 331
AutoFact: Pollen major allergen No.121 isoform 1 n=1 Tax=Cryptomeria japonica RepID=Q588C0_CRYJA 2.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 1.05238e-42
Internal
sp_v3.0_unigene144554 SustainPine v3.0 754
AutoFact: Putative xyloglucan endotransglycosylase/hydrolase (Fragment) n=1 Tax=Eucalyptus globulus RepID=Q4F8J2_EUCGL 4.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 6.859e-34
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain