Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: DNA topoisomerase, type IIA, conserved site

Term: IPR018522  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene68036 SustainPine v3.0 339
AutoFact: Serine/threonine-protein phosphatase (Fragment) n=5 Tax=Magnoliophyta RepID=D7T1Q5_VITVI 2.0e-08
FL-Next: sp=Serine/threonine-protein phosphatase BSL3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Serine/threonine protein phosphatase 5.011e-21
Internal
sp_v3.0_unigene68710 SustainPine v3.0 147
AutoFact: AINTEGUMENTA-like protein n=1 Tax=Pinus thunbergii RepID=Q76H96_PINTH 6.0e-12
FL-Next: tr=AINTEGUMENTA-like protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: AP2 domain-containing transcription factor 1.195e-35
Internal
sp_v3.0_unigene69016 SustainPine v3.0 243
AutoFact: AP2-like ethylene-responsive transcription factor PLT2 n=2 Tax=Arabidopsis RepID=PLET2_ARATH 6.0e-21
FL-Next: tr=AINTEGUMENTA-like protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: AP2 domain-containing transcription factor 0.0
Internal
sp_v3.0_unigene69282 SustainPine v3.0 235
AutoFact: Protein AINTEGUMENTA, putative n=1 Tax=Ricinus communis RepID=B9RM33_RICCO 2.0e-32
FL-Next: tr=AINTEGUMENTA-like protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: AP2 domain-containing transcription factor 0.0
Internal
sp_v3.0_unigene69624 SustainPine v3.0 120
AutoFact: Serine/threonine-protein phosphatase n=2 Tax=Selaginella moellendorffii RepID=D8SBH5_SELML 3.0e-11
FL-Next: sp=Serine/threonine-protein phosphatase BSL2 homolog; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Serine/threonine protein phosphatase 4.559e-32
Internal
sp_v3.0_unigene72066 SustainPine v3.0 205
AutoFact: Unassigned protein
FL-Next: tr=AINTEGUMENTA-like protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: AP2 domain-containing transcription factor 5.35997e-41
Internal
sp_v3.0_unigene72405 SustainPine v3.0 152
AutoFact: Os04g0653600 protein n=5 Tax=Oryza sativa RepID=Q0J9G5_ORYSJ 3.0e-20
FL-Next: tr=AINTEGUMENTA-like protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: AP2 domain-containing transcription factor 0.0
Internal
sp_v3.0_unigene75017 SustainPine v3.0 191
AutoFact: Protein AINTEGUMENTA, putative n=1 Tax=Ricinus communis RepID=B9RM33_RICCO 2.0e-14
FL-Next: tr=AINTEGUMENTA-like protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: AP2 domain-containing transcription factor 7.00649e-45
Internal
sp_v3.0_unigene76578 SustainPine v3.0 350
AutoFact: Xyloglucan endotransglucosylase/hydrolase protein 2, putative n=1 Tax=Ricinus communis RepID=B9SCJ0_RICCO 9.99995e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 1.109e-19
Internal
sp_v3.0_unigene76805 SustainPine v3.0 102
AutoFact: DNA topoisomerase 2 (Fragment) n=1 Tax=Vitis vinifera RepID=D7T341_VITVI 2.0e-09
FL-Next: sp=DNA topoisomerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA topoisomerase 2 1.565e-22
Internal
sp_v3.0_unigene78992 SustainPine v3.0 395
AutoFact: Xyloglucan endotransglycosylase 2 n=1 Tax=Litchi chinensis RepID=A0MMD5_LITCN 2.00386e-43
FL-Next: tr=Putative uncharacterized protein xyloglucan endotransglucosylase; Pinus pinaster (Maritime pine). 0.0
Sma3: Xyloglucan endotransglycosylase 2.122e-37
Internal
sp_v3.0_unigene79511 SustainPine v3.0 187
AutoFact: AP2/EREBP transcription factor [Brassica napus] gb|ABD72476.1| AP2/EREBP transcriptional factor WRI1 [Brassica napus] 2.0e-26
FL-Next: tr=AINTEGUMENTA-like protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: AP2 domain-containing transcription factor 0.0
Internal
sp_v3.0_unigene80781 SustainPine v3.0 405
AutoFact: DNA topoisomerase 2 n=1 Tax=Naegleria gruberi RepID=D2UZM0_NAEGR 3.0e-12
FL-Next: sp=DNA topoisomerase 2; Pisum sativum (Garden pea). 0.0
Internal
sp_v3.0_unigene86299 SustainPine v3.0 222
Sma3: Serine/threonine protein phosphatase 1.722e-14
coding
sp_v3.0_unigene94204 SustainPine v3.0 487
AutoFact: Protein AINTEGUMENTA, putative n=1 Tax=Ricinus communis RepID=B9RM33_RICCO 0.0
FL-Next: tr=AINTEGUMENTA-like protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: AP2 domain-containing transcription factor 0.0
Internal
sp_v3.0_unigene94438 SustainPine v3.0 1363
AutoFact: Xyloglucan endotransglucosylase/hydrolase protein 9, putative n=1 Tax=Ricinus communis RepID=B9S9N2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 3.294e-39
Complete
sp_v3.0_unigene98697 SustainPine v3.0 1069
AutoFact: Serine/threonine-protein phosphatase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S2C2_PHYPA 0.0
FL-Next: sp=Serine/threonine-protein phosphatase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine/threonine protein phosphatase 9.209e-35
C-terminus
sp_v3.0_unigene99099 SustainPine v3.0 217
AutoFact: DNA topoisomerase 2 n=3 Tax=Selaginella moellendorffii RepID=D8RNR7_SELML 3.0e-28
FL-Next: sp=DNA topoisomerase 2; Pisum sativum (Garden pea). 0.0
Sma3: DNA topoisomerase 2 0.0
Internal
sp_v3.0_unigene99311 SustainPine v3.0 259
AutoFact: DNA topoisomerase 2 (Fragment) n=2 Tax=Physcomitrella patens subsp. patens RepID=A9RWX5_PHYPA 6.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA topoisomerase 2 5.79e-26
N-terminus
sp_v3.0_unigene99931 SustainPine v3.0 1851
AutoFact: ABC transporter family protein n=2 Tax=Malpighiales RepID=B9GL16_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ABC transporter 3.856e-15
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain