Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: DNA topoisomerase, type IIA, conserved site

Term: IPR018522  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene52553 SustainPine v3.0 373
AutoFact: Putative xyloglucan endotransglucosylase/hydrolase n=1 Tax=Selaginella kraussiana RepID=Q1XD17_9TRAC 1.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 5.197e-19
Internal
sp_v3.0_unigene52792 SustainPine v3.0 181
AutoFact: DNA topoisomerase 2 (Fragment) n=1 Tax=Vitis vinifera RepID=D7T341_VITVI 3.0e-14
FL-Next: sp=DNA topoisomerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA topoisomerase 2 5.206e-20
Internal
sp_v3.0_unigene54698 SustainPine v3.0 174
AutoFact: Xyloglucan endo-transglucosylase/hydrolase 1 n=1 Tax=Bambusa oldhamii RepID=E6Y1I8_BAMOL 7.0e-14
FL-Next: tr=Putative uncharacterized protein xyloglucan endotransglucosylase; Pinus pinaster (Maritime pine). 0.0
Internal
sp_v3.0_unigene56621 SustainPine v3.0 176
AutoFact: DNA topoisomerase 2 n=1 Tax=Nicotiana tabacum RepID=Q8GSC4_TOBAC 1.0e-18
FL-Next: sp=DNA topoisomerase 2; Pisum sativum (Garden pea). 0.0
Sma3: DNA topoisomerase 2 3.095e-35
Internal
sp_v3.0_unigene57598 SustainPine v3.0 354
AutoFact: Xyloglucan endotransglucosylase/hydrolase 4 n=1 Tax=Malus x domestica RepID=C0IRH7_MALDO 2.0e-30
FL-Next: tr=Putative uncharacterized protein xyloglucan endotransglucosylase; Pinus pinaster (Maritime pine). 0.0
Sma3: Xyloglucan endotransglycosylase 2.724e-30
C-terminus
sp_v3.0_unigene58195 SustainPine v3.0 409
AutoFact: regulator of telomere elongation helicase 1 [Arabidopsis thaliana] gb|AEE36333.1| regulator of telomere elongation helicase 1 [Arabidopsis thaliana] 1.0e-34
FL-Next: tr=Uncharacterized protein; Zea mays (Maize). 0.0
Internal
sp_v3.0_unigene58359 SustainPine v3.0 232
AutoFact: DNA topoisomerase 2 (Fragment) n=1 Tax=Vitis vinifera RepID=D7T341_VITVI 4.0e-12
FL-Next: sp=DNA topoisomerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA topoisomerase 2 1.459e-38
Internal
sp_v3.0_unigene58528 SustainPine v3.0 221
AutoFact: DNA topoisomerase 2 n=1 Tax=Nicotiana tabacum RepID=Q8GSC4_TOBAC 4.0e-10
FL-Next: sp=DNA topoisomerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA topoisomerase 2 4.921e-32
Internal
sp_v3.0_unigene59309 SustainPine v3.0 247
AutoFact: Xyloglucan endotransglycosylase/hydrolase 16 protein (Fragment) n=1 Tax=Solanum lycopersicum RepID=Q4F986_SOLLC 4.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene59402 SustainPine v3.0 250
AutoFact: Pollen major allergen No.121 isoform 1 n=1 Tax=Cryptomeria japonica RepID=Q588C0_CRYJA 3.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 7.015e-36
Internal
sp_v3.0_unigene59860 SustainPine v3.0 304
AutoFact: Putative xyloglucan endotransglucosylase/hydrolase n=1 Tax=Selaginella kraussiana RepID=Q1XD17_9TRAC 9.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 4.572e-21
Putative C-terminus
sp_v3.0_unigene61367 SustainPine v3.0 317
AutoFact: Xyloglucan endotransglucosylase/hydrolase protein 9, putative n=1 Tax=Ricinus communis RepID=B9S9N2_RICCO 4.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglucosylase/hydrolase protein 9, putative 1.154e-07
Internal
sp_v3.0_unigene61398 SustainPine v3.0 236
AutoFact: Xyloglucan endotransglucosylase/hydrolase n=1 Tax=Sagittaria pygmaea RepID=Q4LET4_9LILI 2.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 4.53e-39
Internal
sp_v3.0_unigene63830 SustainPine v3.0 142
AutoFact: Serine/threonine-protein phosphatase n=2 Tax=Selaginella moellendorffii RepID=D8SBH5_SELML 1.0e-09
FL-Next: Isoform 2 of Serine/threonine-protein phosphatase BSL3 OS=Arabidopsis thaliana GN=BSL3 0.0
Sma3: Serine/threonine protein phosphatase 7.91e-17
Internal
sp_v3.0_unigene64408 SustainPine v3.0 292
AutoFact: Xyloglucan endotransglucosylase/hydrolase 3 n=1 Tax=Actinidia eriantha RepID=C0IRG2_ACTER 4.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 4.177e-35
Internal
sp_v3.0_unigene65296 SustainPine v3.0 190
AutoFact: Xyloglucan endotransglucosylase/hydrolase n=1 Tax=Dianthus caryophyllus RepID=D7URZ1_DIACA 5.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 1.366e-31
Internal
sp_v3.0_unigene65677 SustainPine v3.0 145
AutoFact: Xyloglucan endotransglucosylase/hydrolase n=1 Tax=Sagittaria pygmaea RepID=Q4LET7_9LILI 5.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 8.411e-40
Internal
sp_v3.0_unigene66417 SustainPine v3.0 362
AutoFact: AP2/EREBP transcription factor BABY BOOM n=1 Tax=Medicago truncatula RepID=Q5EER4_MEDTR 5.0e-29
FL-Next: tr=AINTEGUMENTA-like protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: AP2 domain-containing transcription factor 2.051e-35
Internal
sp_v3.0_unigene66442 SustainPine v3.0 390
AutoFact: Xyloglucan endotransglycosylase 1 (Fragment) n=1 Tax=Pinus radiata RepID=B1NA42_PINRA 2.99878e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 3.19496e-42
N-terminus
sp_v3.0_unigene67306 SustainPine v3.0 254
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9SYF9_RICCO 2.0e-30
FL-Next: tr=AINTEGUMENTA-like protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: AP2 domain-containing transcription factor 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain