Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: DNA topoisomerase, type IIA, conserved site

Term: IPR018522  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene7619 SustainPine v3.0 928
AutoFact: Rho GDP-dissociation inhibitor, putative n=1 Tax=Ricinus communis RepID=B9SKQ5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Rho GDP-dissociation inhibitor, putative 6.679e-17
Putative Complete
sp_v3.0_unigene9213 SustainPine v3.0 1173
AutoFact: Xyloglucan endotransglycosylase n=2 Tax=Asteroideae RepID=D9I0J0_DAHPI 0.0
FL-Next: sp=Probable xyloglucan endotransglucosylase/hydrolase protein 7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Xyloglucan endotransglycosylase 1.08699e-41
Complete
sp_v3.0_unigene9270 SustainPine v3.0 1616
AutoFact: Serine/threonine-protein phosphatase n=1 Tax=Picea sitchensis RepID=C0PPR8_PICSI 0.0
FL-Next: sp=Serine/threonine-protein phosphatase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine/threonine protein phosphatase 0.0
Putative Complete
sp_v3.0_unigene9517 SustainPine v3.0 2227
AutoFact: Regulatory protein NPR1, putative n=1 Tax=Ricinus communis RepID=B9RK83_RICCO 0.0
FL-Next: sp=Regulatory protein NPR4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: NPR1-like protein 2.921e-36
C-terminus
sp_v3.0_unigene10098 SustainPine v3.0 2582
AutoFact: Serine/threonine-protein phosphatase (Fragment) n=5 Tax=Magnoliophyta RepID=D7T1Q5_VITVI 0.0
FL-Next: sp=Serine/threonine-protein phosphatase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine/threonine protein phosphatase 0.0
Complete
sp_v3.0_unigene11097 SustainPine v3.0 1205
AutoFact: Putative Rho GDP dissociation inhibitor n=1 Tax=Nicotiana tabacum RepID=Q9M404_TOBAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Rho GDP-dissociation inhibitor, putative 6.679e-17
Complete
sp_v3.0_unigene11739 SustainPine v3.0 1377
AutoFact: Xyloglucan endotransglucosylase/hydrolase protein 9, putative n=1 Tax=Ricinus communis RepID=B9S9N2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 2.802e-39
Complete
sp_v3.0_unigene12394 SustainPine v3.0 395
AutoFact: [G] COG2273 Beta-glucanase/Beta-glucan synthetase 2.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 1.4013e-45
Internal
sp_v3.0_unigene12504 SustainPine v3.0 1366
AutoFact: Putative Rho GDP dissociation inhibitor n=1 Tax=Nicotiana tabacum RepID=Q9M404_TOBAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Rho GDP-dissociation inhibitor, putative 6.679e-17
Complete
sp_v3.0_unigene12628 SustainPine v3.0 456
AutoFact: APETALA2-like protein 1 n=1 Tax=Pinus thunbergii RepID=Q76H95_PINTH 0.0
FL-Next: tr=APETALA2-like protein 1; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: AP2 domain-containing transcription factor 2.741e-32
Internal
sp_v3.0_unigene12729 SustainPine v3.0 764
AutoFact: Xyloglucan endotransglucosylase/hydrolase protein 14, putative n=1 Tax=Ricinus communis RepID=B9RKL5_RICCO 0.0
FL-Next: tr=Pollen major allergen No.121 isoform 1; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
Sma3: Xyloglucan endotransglucosylase/hydrolase 8.035e-35
C-terminus
sp_v3.0_unigene14289 SustainPine v3.0 1248
AutoFact: Xyloglucan endotransglucosylase/hydrolase protein 22, putative n=2 Tax=Ricinus communis RepID=B9SJQ9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 6.514e-36
Complete
sp_v3.0_unigene14553 SustainPine v3.0 715
AutoFact: Serine/threonine-protein phosphatase BSL2 n=9 Tax=rosids RepID=BSL2_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine/threonine protein phosphatase 3.171e-29
Internal
sp_v3.0_unigene14757 SustainPine v3.0 560
AutoFact: regulator of telomere elongation helicase 1 [Arabidopsis thaliana] gb|AEE36333.1| regulator of telomere elongation helicase 1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene17152 SustainPine v3.0 1478
AutoFact: Pollen major allergen No.121 isoform 1 n=1 Tax=Cryptomeria japonica RepID=Q588C0_CRYJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 5.369e-36
Complete
sp_v3.0_unigene17218 SustainPine v3.0 1349
AutoFact: Pollen major allergen No.121 isoform 1 n=1 Tax=Cryptomeria japonica RepID=Q588C0_CRYJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 2.651e-33
Complete
sp_v3.0_unigene17320 SustainPine v3.0 1161
AutoFact: Xyloglucan endotransglycosylase n=2 Tax=Asteroideae RepID=D9I0J0_DAHPI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 1.28303e-41
Complete
sp_v3.0_unigene17335 SustainPine v3.0 1441
AutoFact: xyloglucan endotransglycosylase/hydrolase precursor XTH-30 [Populus tremula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 4.258e-39
Complete
sp_v3.0_unigene17721 SustainPine v3.0 1246
AutoFact: Xyloglucan endotransglucosylase/hydrolase protein 9, putative n=1 Tax=Ricinus communis RepID=B9S9N2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 3.581e-39
Complete
sp_v3.0_unigene17960 SustainPine v3.0 1217
AutoFact: [G] COG2273 Beta-glucanase/Beta-glucan synthetase 1.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 8.03e-36
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain