Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: DNA topoisomerase, type IIA, conserved site

Term: IPR018522  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene151033 SustainPine v3.0 289
• AutoFact: PREDICTED: similar to ATP-binding cassette sub-family F member 2 [Tribolium castaneum] gb|EFA03773.1| hypothetical protein TcasGA2_TC013884 [Tribolium castaneum] 2.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ABC transporter 1.143e-14
Internal
sp_v3.0_unigene152301 SustainPine v3.0 272
• AutoFact: ATP-binding cassette sub-family F member 1 [Xenopus laevis] gb|AAH81034.1| MGC81714 protein [Xenopus laevis] 3.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-dependent transporter, putative 3.488e-07
Putative C-terminus
sp_v3.0_unigene152974 SustainPine v3.0 366
• AutoFact: DNA gyrase subunit B n=82 Tax=Bacteroidetes RepID=A6GX10_FLAPJ 7.9874e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DNA gyrase subunit B, chloroplastic/mitochondrial 1.351e-08
Internal
sp_v3.0_unigene154079 SustainPine v3.0 251
• AutoFact: PREDICTED: ATP-binding cassette sub-family F member 1-like isoform 1 [Apis mellifera] 2.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-dependent transporter, putative 1.082e-10
C-terminus
sp_v3.0_unigene162741 SustainPine v3.0 201
• AutoFact: putative phosphoprotein phosphatase [Arabidopsis thaliana] 1.0e-16
• FL-Next: Isoform 2 of Serine/threonine-protein phosphatase BSL3 OS=Arabidopsis thaliana GN=BSL3 0.0
• Sma3: Serine/threonine protein phosphatase 7.73e-26
Internal
sp_v3.0_unigene163526 SustainPine v3.0 426
• AutoFact: Xyloglucan endotransglucosylase/hydrolase n=3 Tax=Gossypium hirsutum RepID=E3UZI7_GOSHI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Xyloglucan endotransglycosylase 0.0
Internal
sp_v3.0_unigene164711 SustainPine v3.0 207
• AutoFact: Putative xyloglucan endotransglycosylase type 1 (Fragment) n=1 Tax=Pinus pinaster RepID=Q8VX84_PINPS 2.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Xyloglucan endotransglycosylase 3.25e-26
Internal
sp_v3.0_unigene165174 SustainPine v3.0 197
• AutoFact: DNA topoisomerase 2 (Fragment) n=1 Tax=Vitis vinifera RepID=D7T341_VITVI 1.0e-23
• FL-Next: sp=DNA topoisomerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DNA topoisomerase 2 0.0
Internal
sp_v3.0_unigene168175 SustainPine v3.0 274
• AutoFact: DNA topoisomerase 2 (Fragment) n=1 Tax=Vitis vinifera RepID=D7T341_VITVI 1.0e-33
• FL-Next: sp=DNA topoisomerase 2; Pisum sativum (Garden pea). 0.0
• Sma3: DNA topoisomerase 2 5.04047e-42
Internal
sp_v3.0_unigene168348 SustainPine v3.0 205
• AutoFact: DNA topoisomerase 2 n=2 Tax=Oryza sativa Japonica Group RepID=Q6Z8D9_ORYSJ 5.0e-29
• FL-Next: sp=DNA topoisomerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DNA topoisomerase 2 0.0
Internal
sp_v3.0_unigene183563 SustainPine v3.0 816
• AutoFact: DNA topoisomerase 2 n=2 Tax=Malus x domestica RepID=Q2L363_MALDO 3.0e-08
• FL-Next: sp=DNA topoisomerase 2; Pisum sativum (Garden pea). 0.0
• Sma3: DNA topoisomerase 2 5.327e-32
Internal
sp_v3.0_unigene185985 SustainPine v3.0 558
• AutoFact: Serine/threonine-protein phosphatase n=1 Tax=Medicago sativa RepID=O65845_MEDSA 0.0
• FL-Next: sp=Serine/threonine-protein phosphatase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine/threonine protein phosphatase 0.0
C-terminus
sp_v3.0_unigene187027 SustainPine v3.0 307
• AutoFact: xyloglucan endotransglycosylase 2 [Litchi chinensis] 1.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Xyloglucan endotransglycosylase 3.3407e-42
Internal
sp_v3.0_unigene187880 SustainPine v3.0 585
• AutoFact: Unassigned protein 8.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene188602 SustainPine v3.0 553
• AutoFact: putative xyloglucan endotransglucosylase/hydrolase [Selaginella kraussiana] 2.00386e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Xyloglucan endotransglycosylase 8.158e-40
C-terminus
sp_v3.0_unigene188609 SustainPine v3.0 306
• AutoFact: xyloglucan endotransglycosylase [Musa acuminata] 2.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Xyloglucan endotransglycosylase 1.84e-21
Internal
sp_v3.0_unigene189458 SustainPine v3.0 762
• AutoFact: Os06g0318300 protein n=4 Tax=Oryza sativa RepID=Q5ZA14_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Rho GDP-dissociation inhibitor, putative 7.428e-17
C-terminus
sp_v3.0_unigene196928 SustainPine v3.0 762
• AutoFact: Pollen major allergen No.121 isoform 1 n=1 Tax=Cryptomeria japonica RepID=Q588C0_CRYJA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Xyloglucan endotransglycosylase 5.595e-39
C-terminus
sp_v3.0_unigene200283 SustainPine v3.0 398
• AutoFact: Putative rho GDP-dissociation inhibitor 1 n=1 Tax=Dictyostelium discoideum RepID=GDIR1_DICDI 2.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Rho GDP dissociation inhibitor 2 1.214e-09
C-terminus
sp_v3.0_unigene202950 SustainPine v3.0 511
• AutoFact: Putative xyloglucan endotransglucosylase/hydrolase n=1 Tax=Selaginella kraussiana RepID=Q1XD17_9TRAC 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain