Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: Ribosomal RNA large subunit methyltransferase RlmN;

Term: IPR004383  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene923 SustainPine v3.0 1604
• AutoFact: radical SAM domain-containing protein [Arabidopsis thaliana] gb|AAL06909.1| At2g39670/F17A14.4 [Arabidopsis thaliana] gb|AAL32891.1| Unknown protein [Arabidopsis thaliana] gb|AAB97122.2| expressed protein [Arabidopsis thaliana] gb|AAN15379.1| Unknown prot 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr13 scaffold_17, whole genome shotgun sequence 0.0
Putative Complete
sp_v3.0_unigene4969 SustainPine v3.0 876
• AutoFact: radical SAM domain-containing protein [Arabidopsis thaliana] gb|AAK96886.1| Unknown protein [Arabidopsis thaliana] gb|AAM10038.1| unknown protein [Arabidopsis thaliana] gb|AEE33668.1| radical SAM domain-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene5412 SustainPine v3.0 1508
• AutoFact: radical SAM domain-containing protein [Arabidopsis thaliana] gb|AAO41968.1| unknown protein [Arabidopsis thaliana] gb|AAO50541.1| unknown protein [Arabidopsis thaliana] gb|AEE76269.1| radical SAM domain-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene10792 SustainPine v3.0 1533
• AutoFact: metal-dependent phosphohydrolase HD domain-containing protein [Arabidopsis thaliana] gb|AAK63855.1|AF389282_1 AT5g40270/MSN9_170 [Arabidopsis thaliana] dbj|BAB10908.1| unnamed protein product [Arabidopsis thaliana] gb|AAM26721.1| AT5g40270/MSN9_170 [Arabi 0.0
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
• Sma3: Catalytic, putative 7.597e-06
C-terminus
sp_v3.0_unigene12266 SustainPine v3.0 1735
• AutoFact: metal-dependent phosphohydrolase HD domain-containing protein [Arabidopsis thaliana] gb|AAK63855.1|AF389282_1 AT5g40270/MSN9_170 [Arabidopsis thaliana] dbj|BAB10908.1| unnamed protein product [Arabidopsis thaliana] gb|AAM26721.1| AT5g40270/MSN9_170 [Arabi 0.0
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
• Sma3: Catalytic, putative 7.597e-06
Complete
sp_v3.0_unigene29034 SustainPine v3.0 718
• AutoFact: metal-dependent phosphohydrolase HD domain-containing protein [Arabidopsis thaliana] gb|AAK63855.1|AF389282_1 AT5g40270/MSN9_170 [Arabidopsis thaliana] dbj|BAB10908.1| unnamed protein product [Arabidopsis thaliana] gb|AAM26721.1| AT5g40270/MSN9_170 [Arabi 0.0
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
• Sma3: Catalytic, putative 4.528e-06
C-terminus
sp_v3.0_unigene29129 SustainPine v3.0 1715
• AutoFact: radical SAM domain-containing protein [Arabidopsis thaliana] gb|AAK96886.1| Unknown protein [Arabidopsis thaliana] gb|AAM10038.1| unknown protein [Arabidopsis thaliana] gb|AEE33668.1| radical SAM domain-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene57911 SustainPine v3.0 320
• AutoFact: radical SAM domain-containing protein [Arabidopsis thaliana] gb|AAO41968.1| unknown protein [Arabidopsis thaliana] gb|AAO50541.1| unknown protein [Arabidopsis thaliana] gb|AEE76269.1| radical SAM domain-containing protein [Arabidopsis thaliana] 2.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene64580 SustainPine v3.0 275
• AutoFact: Catalytic, putative n=1 Tax=Ricinus communis RepID=B9SHC0_RICCO 3.0e-34
• FL-Next: tr=Catalytic, putative; Ricinus communis (Castor bean). 0.0
• Sma3: Catalytic, putative 6.055e-06
Internal
sp_v3.0_unigene67844 SustainPine v3.0 323
• AutoFact: radical SAM domain-containing protein [Arabidopsis thaliana] gb|AAK96886.1| Unknown protein [Arabidopsis thaliana] gb|AAM10038.1| unknown protein [Arabidopsis thaliana] gb|AEE33668.1| radical SAM domain-containing protein [Arabidopsis thaliana] 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene130501 SustainPine v3.0 426
• AutoFact: radical SAM domain-containing protein [Arabidopsis thaliana] gb|AAO41968.1| unknown protein [Arabidopsis thaliana] gb|AAO50541.1| unknown protein [Arabidopsis thaliana] gb|AEE76269.1| radical SAM domain-containing protein [Arabidopsis thaliana] 5.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene131300 SustainPine v3.0 309
• AutoFact: Catalytic, putative n=1 Tax=Ricinus communis RepID=B9RUU0_RICCO 4.0e-35
• FL-Next: tr=Catalytic, putative; Ricinus communis (Castor bean). 0.0
• Sma3: Catalytic, putative 4.528e-06
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain