Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: PAN-2 domain

Term: IPR013227  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene157663 SustainPine v3.0 359
• AutoFact: Gag-protease-integrase-RT-RNaseH polyprotein n=1 Tax=Glycine max RepID=B5U9F7_SOYBN 0.0
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.433e-30
Internal
sp_v3.0_unigene159449 SustainPine v3.0 379
• AutoFact: Integrase n=1 Tax=Cucumis melo subsp. melo RepID=A6YTD9_CUCME 7.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.574e-15
Putative C-terminus
sp_v3.0_unigene159581 SustainPine v3.0 412
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY11_PICAB 1.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 0.0
Internal
sp_v3.0_unigene159940 SustainPine v3.0 491
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 1.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 4.521e-36
N-terminus
sp_v3.0_unigene160035 SustainPine v3.0 437
• AutoFact: cysteine-rich receptor-like protein kinase 6 [Arabidopsis thaliana] sp|Q9C5S9.1|CRK6_ARATH RecName: Full=Cysteine-rich receptor-like protein kinase 6; Short=Cysteine-rich RLK6; AltName: Full=Receptor-like protein kinase 5; Flags: Precursor gb|AAK28316.1|A 4.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome undetermined scaffold_298, whole genome shotgun sequence 2.4e-06
Putative C-terminus
sp_v3.0_unigene160187 SustainPine v3.0 430
• AutoFact: RVT_2 domain containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 3.932e-34
Internal
sp_v3.0_unigene160189 SustainPine v3.0 311
• AutoFact: Serine/threonine-protein kinase PBS1, putative n=1 Tax=Ricinus communis RepID=B9SP66_RICCO 1.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene160328 SustainPine v3.0 447
• AutoFact: Integrase n=1 Tax=Cucumis melo subsp. melo RepID=A6YTD9_CUCME 3.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene160354 SustainPine v3.0 417
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q4JQ43_GINBI 1.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative polyprotein 2.801e-16
Internal
sp_v3.0_unigene160483 SustainPine v3.0 408
• AutoFact: NV19190; similar to pol polyprotein 3.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 3.213e-07
N-terminus
sp_v3.0_unigene160721 SustainPine v3.0 462
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus coulteri RepID=Q06298_PINCU 2.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 9.386e-30
Internal
sp_v3.0_unigene160733 SustainPine v3.0 484
• AutoFact: S-receptor kinase, putative n=1 Tax=Ricinus communis RepID=B9RVX8_RICCO 3.0e-20
• FL-Next: sp=S-locus-specific glycoprotein S13; Brassica oleracea (Wild cabbage). 0.0
Putative N-terminus
sp_v3.0_unigene161482 SustainPine v3.0 204
• AutoFact: cysteine-rich receptor-like protein kinase 2 [Arabidopsis thaliana] sp|Q9CAL3.1|CRK2_ARATH RecName: Full=Cysteine-rich receptor-like protein kinase 2; Short=Cysteine-rich RLK2; Flags: Precursor gb|AAG52471.1|AC010796_10 putative protein kinase; 37247-3480 5.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr19 scaffold_4, whole genome shotgun sequence 1.342e-18
Internal
sp_v3.0_unigene161497 SustainPine v3.0 247
• AutoFact: Gag-protease-integrase-RT-RNaseH polyprotein n=1 Tax=Glycine max RepID=B5U9F7_SOYBN 2.0e-35
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Transposon protein, putative, unclassified 7.069e-08
Internal
sp_v3.0_unigene161690 SustainPine v3.0 431
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QXM6_ORYSJ 1.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 6.82e-17
Putative N-terminus
sp_v3.0_unigene161896 SustainPine v3.0 469
• AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q7Y141_ORYSJ 2.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 3.441e-16
Putative N-terminus
sp_v3.0_unigene162100 SustainPine v3.0 464
• AutoFact: Copia-type polyprotein, putative n=4 Tax=Arabidopsis thaliana RepID=Q9C739_ARATH 9.94922e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative polyprotein 9.686e-13
Putative C-terminus
sp_v3.0_unigene162380 SustainPine v3.0 450
• AutoFact: S-receptor kinase, putative n=1 Tax=Ricinus communis RepID=B9RP41_RICCO 9.94922e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: S-receptor kinase, putative 4.952e-16
Internal
sp_v3.0_unigene162400 SustainPine v3.0 342
• AutoFact: protein kinase family protein [Arabidopsis thaliana] gb|AED93254.1| protein kinase family protein [Arabidopsis thaliana] 9.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative S-domain receptor-like protein kinase 3.349e-15
Internal
sp_v3.0_unigene162650 SustainPine v3.0 252
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY10_PICAB 3.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain