Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Protein translocase complex, SecE/Sec61-gamma subunit

Term: IPR001901  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene54260 SustainPine v3.0 413
• AutoFact: Polyprotein n=1 Tax=Solanum lycopersicum RepID=Q9ZS84_SOLLC 3.00004e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 2.45e-19
Putative Complete
sp_v3.0_unigene54461 SustainPine v3.0 369
• AutoFact: polyprotein [Glycine max] 8.0e-28
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, unclassified 3.12e-12
Putative C-terminus
sp_v3.0_unigene54619 SustainPine v3.0 298
• AutoFact: Pol protein integrase region (Fragment) n=6 Tax=Spermatophyta RepID=Q9M6N3_9CONI 1.0e-33
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Pol protein integrase region 0.0
Internal
sp_v3.0_unigene54702 SustainPine v3.0 355
• AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 4.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 9.278e-21
Putative Complete
sp_v3.0_unigene54806 SustainPine v3.0 460
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 1.966e-26
Putative Complete
sp_v3.0_unigene54946 SustainPine v3.0 344
• AutoFact: pol protein integrase region [Pinus brutia] 3.0e-32
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Pol protein integrase region 1.87774e-43
Internal
sp_v3.0_unigene54972 SustainPine v3.0 468
• AutoFact: Putative gag-pol polyprotein n=1 Tax=Zea mays RepID=Q8SA91_MAIZE 1.0e-26
• FL-Next: tr=Putative gag-pol polyprotein; Zea mays (Maize). 0.0
Internal
sp_v3.0_unigene55029 SustainPine v3.0 427
• AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 8.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 9.827e-20
Putative Complete
sp_v3.0_unigene55571 SustainPine v3.0 321
• AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 8.0e-28
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 3.442e-33
Internal
sp_v3.0_unigene55977 SustainPine v3.0 388
• AutoFact: Pol protein integrase region (Fragment) n=6 Tax=Spermatophyta RepID=Q9M6N3_9CONI 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Pol protein integrase region 0.0
Internal
sp_v3.0_unigene56162 SustainPine v3.0 381
• AutoFact: Predicted protein n=2 Tax=Physcomitrella patens subsp. patens RepID=A9T5R6_PHYPA 2.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene56411 SustainPine v3.0 263
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Cycas revoluta RepID=Q56GG4_CYCRE 2.0e-20
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, unclassified 2.223e-23
Internal
sp_v3.0_unigene56506 SustainPine v3.0 516
• AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SQW9_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 2.365e-29
Putative Complete
sp_v3.0_unigene56993 SustainPine v3.0 475
• AutoFact: OSJNBa0053B21.11 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7XKR0_ORYSJ 3.0e-27
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, unclassified 4.153e-11
Putative C-terminus
sp_v3.0_unigene57010 SustainPine v3.0 294
• AutoFact: Gag-pol polyprotein n=3 Tax=Zea mays RepID=Q8L7J3_MAIZE 1.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 2.902e-10
N-terminus
sp_v3.0_unigene57503 SustainPine v3.0 356
• AutoFact: gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis thaliana] dbj|BAB03109.1| retroelement pol polyprotein [Arabidopsis thaliana] 9.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 4.256e-23
Putative Complete
sp_v3.0_unigene57546 SustainPine v3.0 247
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2R2N6_ORYSJ 5.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 1.329e-12
Putative Complete
sp_v3.0_unigene57679 SustainPine v3.0 232
• AutoFact: Pol protein integrase region (Fragment) n=6 Tax=Spermatophyta RepID=Q9M6N3_9CONI 2.0e-25
• FL-Next: tr=Putative retroelement pol polyprotein; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Pol protein integrase region 0.0
Internal
sp_v3.0_unigene57727 SustainPine v3.0 449
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q10PF2_ORYSJ 1.0e-37
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Polyprotein 4.833e-15
Putative C-terminus
sp_v3.0_unigene58311 SustainPine v3.0 396
• AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H n=2 Tax=Medicago truncatula RepID=A2Q2J0_MEDTR 2.0e-31
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain