Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Protein translocase complex, SecE/Sec61-gamma subunit

Term: IPR001901  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene45898 SustainPine v3.0 1536
• AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H n=2 Tax=Medicago truncatula RepID=A2Q2J0_MEDTR 0.0
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, unclassified 7.98e-26
Putative Complete
sp_v3.0_unigene45930 SustainPine v3.0 1032
• AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 7.156e-11
Putative Complete
sp_v3.0_unigene46643 SustainPine v3.0 375
• AutoFact: Polyprotein n=1 Tax=Glycine max RepID=Q84ZV5_SOYBN 3.0e-32
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Polyprotein 2.241e-20
Putative C-terminus
sp_v3.0_unigene49191 SustainPine v3.0 304
• AutoFact: cullin-like protein [Oryza sativa Japonica Group] gb|AAQ01196.1| CUL1 [Oryza sativa Japonica Group] 5.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene50691 SustainPine v3.0 208
• AutoFact: cullin 1C [Nicotiana tabacum] 2.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative cullin 6.495e-08
Internal
sp_v3.0_unigene51478 SustainPine v3.0 422
• AutoFact: cullin 1-like protein C [Petunia integrifolia subsp. inflata] 6.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene51714 SustainPine v3.0 406
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Ginkgo biloba RepID=O82684_GINBI 1.0e-39
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 8.6e-17
Putative Complete
sp_v3.0_unigene51932 SustainPine v3.0 335
• AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H n=2 Tax=Medicago truncatula RepID=A2Q2J0_MEDTR 2.0e-29
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, unclassified 1.81e-15
Putative N-terminus
sp_v3.0_unigene51939 SustainPine v3.0 497
• AutoFact: Gypsy/Ty3 element polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C7H8_ARATH 3.0e-31
• FL-Next: tr=Gypsy/Ty3 element polyprotein, putative; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 2.666e-11
Internal
sp_v3.0_unigene52162 SustainPine v3.0 223
• AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H n=2 Tax=Medicago truncatula RepID=A2Q2J0_MEDTR 3.0e-20
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 1.039e-08
Internal
sp_v3.0_unigene52232 SustainPine v3.0 387
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene52307 SustainPine v3.0 393
• AutoFact: Polyprotein n=1 Tax=Glycine max RepID=Q84ZV5_SOYBN 5.0e-36
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 1.317e-17
Putative C-terminus
sp_v3.0_unigene52327 SustainPine v3.0 373
• AutoFact: Pol protein integrase region (Fragment) n=6 Tax=Spermatophyta RepID=Q9M6N3_9CONI 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Pol protein integrase region 0.0
Internal
sp_v3.0_unigene53061 SustainPine v3.0 382
• AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold n=1 Tax=Medicago truncatula RepID=A2Q2C7_MEDTR 5.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 5.568e-25
Putative Complete
sp_v3.0_unigene53313 SustainPine v3.0 488
• AutoFact: OSJNBa0032F06.19 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7XPW2_ORYSJ 3.99931e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.941e-32
Putative Complete
sp_v3.0_unigene53571 SustainPine v3.0 473
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Taxus baccata RepID=Q56GF5_TAXBA 6.0e-26
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 2.386e-22
N-terminus
sp_v3.0_unigene53793 SustainPine v3.0 365
• AutoFact: gypsy/Ty3 element polyprotein, putative [Arabidopsis thaliana] 4.0e-24
• FL-Next: tr=OSIGBa0118P15.5 protein; Oryza sativa (Rice). 0.0
• Sma3: Pol protein integrase region 1.26117e-44
Internal
sp_v3.0_unigene54049 SustainPine v3.0 414
• AutoFact: Polyprotein n=1 Tax=Glycine max RepID=Q84ZV5_SOYBN 1.0e-31
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Polyprotein 1.233e-15
Putative N-terminus
sp_v3.0_unigene54121 SustainPine v3.0 196
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 5.101e-11
Internal
sp_v3.0_unigene54127 SustainPine v3.0 405
• AutoFact: Polyprotein n=1 Tax=Glycine max RepID=Q84ZV5_SOYBN 3.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 1.076e-18
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain