Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, GATA-type

Term: IPR000679  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene906 SustainPine v3.0 2486
AutoFact: Male-specific transcription factor M88B7.2 n=1 Tax=Marchantia polymorpha RepID=Q6J3Q5_MARPO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: GATA transcription factor 25 8.65e-15
Complete
sp_v3.0_unigene2290 SustainPine v3.0 1507
AutoFact: GATA transcription factor 12 n=2 Tax=Arabidopsis thaliana RepID=GAT12_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: GATA zinc finger family protein 8.923e-18
Complete
sp_v3.0_unigene3196 SustainPine v3.0 2305
AutoFact: Male-specific transcription factor M88B7.2 n=1 Tax=Marchantia polymorpha RepID=Q6J3Q5_MARPO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: GATA transcription factor 25 8.568e-15
Complete
sp_v3.0_unigene3232 SustainPine v3.0 1107
AutoFact: Lysine-specific histone demethylase 1 homolog 3 n=3 Tax=Oryza sativa RepID=LDL3_ORYSJ 0.0
FL-Next: sp=Lysine-specific histone demethylase 1 homolog 3; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Protein LSD1-LIKE 2 1.869e-08
C-terminus
sp_v3.0_unigene3305 SustainPine v3.0 4215
AutoFact: ubiquitin carboxyl-terminal hydrolase 12 [Arabidopsis thaliana] gb|AAK25908.1|AF360198_1 putative ubiquitin-specific protease UBP12 [Arabidopsis thaliana] gb|AAN13185.1| putative ubiquitin-specific protease UBP12 [Arabidopsis thaliana] gb|AED91040.1| ubiq 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin carboxyl-terminal hydrolase 1.959e-11
Complete
sp_v3.0_unigene6052 SustainPine v3.0 2868
AutoFact: Noc2p family protein [Arabidopsis thaliana] dbj|BAE98878.1| hypothetical protein [Arabidopsis thaliana] gb|AEE79394.1| Noc2p family protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Nucleolar complex protein 2 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Protein NOC2 homolog 1.147e-09
N-terminus
sp_v3.0_unigene6887 SustainPine v3.0 2461
AutoFact: ubiquitin carboxyl-terminal hydrolase [Arabidopsis thaliana] 0.0
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 13; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Ubiquitin carboxyl-terminal hydrolase 5.716e-07
C-terminus
sp_v3.0_unigene6971 SustainPine v3.0 2197
AutoFact: GATA transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RQG2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: GATA transcription factor, putative 2.573e-09
Complete
sp_v3.0_unigene8687 SustainPine v3.0 1309
AutoFact: GATA transcription factor 12 [Arabidopsis thaliana] sp|P69781.1|GAT12_ARATH RecName: Full=GATA transcription factor 12 dbj|BAH30596.1| hypothetical protein [Arabidopsis thaliana] gb|AED93492.1| GATA transcription factor 12 [Arabidopsis thaliana] 4.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
C-terminus
sp_v3.0_unigene8807 SustainPine v3.0 1516
AutoFact: GATA transcription factor 21 [Arabidopsis thaliana] sp|Q5HZ36.2|GAT21_ARATH RecName: Full=GATA transcription factor 21 dbj|BAA97205.1| unnamed protein product [Arabidopsis thaliana] gb|ABG25059.1| At5g56860 [Arabidopsis thaliana] gb|AED96815.1| GATA trans 4.0e-11
FL-Next: sp=GATA transcription factor 20; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: GATA transcription factor 19 3.279e-09
Complete
sp_v3.0_unigene8881 SustainPine v3.0 1880
AutoFact: Ubiquitin carboxyl-terminal hydrolase 12 n=8 Tax=Brassicaceae RepID=UBP12_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin carboxyl-terminal hydrolase 4.139e-09
Complete
sp_v3.0_unigene9175 SustainPine v3.0 2703
AutoFact: GATA transcription factor 26 [Arabidopsis thaliana] sp|Q8W4H1.1|GAT26_ARATH RecName: Full=GATA transcription factor 26 gb|AAL32640.1| Unknown protein [Arabidopsis thaliana] gb|AAV85711.1| At4g17570 [Arabidopsis thaliana] gb|AEE83912.1| GATA transcription 0.0
FL-Next: sp=GATA transcription factor 26; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene10507 SustainPine v3.0 1630
AutoFact: AG-motif binding protein-4 [Nicotiana tabacum] 8.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: GATA zinc finger family protein 8.989e-14
Complete
sp_v3.0_unigene12595 SustainPine v3.0 1021
AutoFact: GATA transcription factor 21 [Arabidopsis thaliana] sp|Q5HZ36.2|GAT21_ARATH RecName: Full=GATA transcription factor 21 dbj|BAA97205.1| unnamed protein product [Arabidopsis thaliana] gb|ABG25059.1| At5g56860 [Arabidopsis thaliana] gb|AED96815.1| GATA trans 5.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene15421 SustainPine v3.0 317
AutoFact: Unassigned protein 3.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene20459 SustainPine v3.0 1650
AutoFact: Lysine-specific histone demethylase, putative n=1 Tax=Ricinus communis RepID=B9R844_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SWIRM domain protein 2.541e-12
N-terminus
sp_v3.0_unigene23404 SustainPine v3.0 2929
AutoFact: flowering locus D [Arabidopsis thaliana] 0.0
FL-Next: sp=Lysine-specific histone demethylase 1 homolog 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: SWIRM domain protein 1.919e-12
Complete
sp_v3.0_unigene25054 SustainPine v3.0 852
AutoFact: transcription factor-like protein [Arabidopsis thaliana] 5.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene28392 SustainPine v3.0 1219
AutoFact: ubiquitin carboxyl-terminal hydrolase 12 [Arabidopsis thaliana] gb|AAK25908.1|AF360198_1 putative ubiquitin-specific protease UBP12 [Arabidopsis thaliana] gb|AAN13185.1| putative ubiquitin-specific protease UBP12 [Arabidopsis thaliana] gb|AED91040.1| ubiq 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin carboxyl-terminal hydrolase, putative 1.047e-06
Putative Complete
sp_v3.0_unigene28469 SustainPine v3.0 1366
AutoFact: GATA transcription factor 2 [Arabidopsis thaliana] sp|O49741.1|GATA2_ARATH RecName: Full=GATA transcription factor 2; Short=AtGATA-2 emb|CAA74000.1| homologous to GATA-binding transcription factors [Arabidopsis thaliana] gb|AAN41321.1| putative GATA-type 4.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain